Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4708 |
Symbol | |
ID | 6145178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4808281 |
End bp | 4809276 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641619524 |
Product | inner membrane ABC transporter permease protein YjfF |
Protein accession | YP_001746632 |
Protein GI | 170682693 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | [TIGR01222] septum site-determining protein MinC |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATAAAAC GTAATTTGCC ACTGATGATC ACCATCGGCG TCTTTGTGTT GGGTTATATC TACTGTCTGA CCCAGTTTCC CGGTTTTGCT TCCACAAGAG TGATCTGCAA TATCCTGACT GATAATGCCT TTCTTGGGAT AATCGCCGTT GGTATGACCT TTGTGATCCT CTCCGGTGGG ATCGATCTCT CCGTCGGTTC GGTGATCGCC TTTACCGGCG TGTTTCTGGC AAAAGTGATT GGCGATTTCG GCCTCTCGCC GTTGCTGGCG TTTCCGCTAG TGCTGGTGAT GGGCTGTGCT TTCGGCGCAT TTATGGGGCT TTTGATCGAC GCCCTGAAGA TCCCGGCGTT TATTATTACT CTGGCGGGAA TGTTCTTTTT GCGTGGCGTC AGCTATCTCG TTTCGGAAGA GTCGATCCCG ATAAATCATC CTGTTTATGA CACGCTCTCA AGCCTTGCAT GGAAAATCCC TGGCGGCGGT CGCTTAAGTG CGATGGGGCT GCTGATGCTG GCGGTGGTGG TTATCGGTAT TTTCCTCGCG CATCGTACCC GTTTTGGTAA TCAGGTATAC GCCATTGGCG GCAACGCAAC GTCGGCGAAC CTGATGGGGA TTTCCACTCG CAGCACCACT ATTCGCATTT ATATGCTCTC CACCGGACTG GCAACGCTGG CGGGGATTGT CTTCTCGATT TATACCCAGG CCGGATATGC GCTGGCGGGC GTAGGTGTGG AACTGGATGC TATCGCCTCA GTGGTAATTG GCGGTACGCT TTTGAGCGGT GGCGTTGGAA CGGTATTAGG GACGCTTTTT GGCGTGGCGA TTCAGGGACT GATTCAGACT TACATAAACT TTGATGGCAC GCTGAGTTCC TGGTGGACGA AAATCGCCAT CGGTATTTTG TTGTTTATTT TTATAGCATT ACAGCGTGGA TTAACGGTGC TGTGGGAGAA TCGTCAGAGT TCGCCTGTGA CAAGAGTCAA CATTGCGCAG CGATAA
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Protein sequence | MIKRNLPLMI TIGVFVLGYI YCLTQFPGFA STRVICNILT DNAFLGIIAV GMTFVILSGG IDLSVGSVIA FTGVFLAKVI GDFGLSPLLA FPLVLVMGCA FGAFMGLLID ALKIPAFIIT LAGMFFLRGV SYLVSEESIP INHPVYDTLS SLAWKIPGGG RLSAMGLLML AVVVIGIFLA HRTRFGNQVY AIGGNATSAN LMGISTRSTT IRIYMLSTGL ATLAGIVFSI YTQAGYALAG VGVELDAIAS VVIGGTLLSG GVGTVLGTLF GVAIQGLIQT YINFDGTLSS WWTKIAIGIL LFIFIALQRG LTVLWENRQS SPVTRVNIAQ R
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