Gene EcSMS35_4690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4690 
Symbol 
ID6144764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4789107 
End bp4789967 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content53% 
IMG OID641619506 
ProductNmrA family protein 
Protein accessionYP_001746614 
Protein GI170683021 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.557719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAA TTACCGGCGC AACCGGCCAA CTTGGTCACT ATGTTATTGA ATCCTTGATG 
AAAACGGTTC CTGCCAGCCA AATAGTGGCT ATCGTTCGTA ATCCGGCAAA AGCCCAGGCA
CTGACAGCAC AAGGCATTAC CGTGCGTCAG GCTGATTACG GCGATGAAGC CGCACTGACA
TCTGCGCTTC AGGGAGTGGA AAAACTACTG CTGATCTCTT CCAGCGAAGT GGGTCAACGT
GCCCCGCAGC ATCGTAATGT TATTAATGCC GCAAAGGCGG CTGGTGTGAA ATTTATCGCT
TATACCAGTC TGCTTCACGC GGATAAATCT CCGCTCGGCC TCGCCGATGA GCACATTGAG
ACGGAGAAAA TGTTGGCTGA TTCTGGCATC GTTTACACCC TGCTGCGCAA CGGCTGGTAC
AGCGAAAACT ACCTCGCCAG CGCCCCGGCA GCACTGAAAC ACGGCGTATT TATCGGTGCG
GCGGGCGATG GCAAAATCGC CTCAGCAACG CGGGCAGATT ATGCGGCAGC TGCGGCACGC
GTGATTAGCG AAGCAGGTCA CGAAGGCAAG GTTTATGAAC TGGCAGGTGA TAGCGCCTGG
ACACTGACAC AGTTAGCGGC GGAACTCACC AAACAGAGCG GCAAACAGGT TACCTATCAA
AATCTGAGTG AAGCTGATTT CGCCGCGGCA CTGAAAAGCG TCGGACTGCC TGACGGACTG
GCGGATATGC TGGCGGATTC TGACGTTGGC GCATCGAAAG GTGGTCTGTT TGATAACAGC
AAAACGCTTA GCAAATTGAT TGGCCGCCCA ACGACAACGT TAGCCGAAAG CGTAAGCCAT
CTTTTTAATG TTAATAACTA G
 
Protein sequence
MIAITGATGQ LGHYVIESLM KTVPASQIVA IVRNPAKAQA LTAQGITVRQ ADYGDEAALT 
SALQGVEKLL LISSSEVGQR APQHRNVINA AKAAGVKFIA YTSLLHADKS PLGLADEHIE
TEKMLADSGI VYTLLRNGWY SENYLASAPA ALKHGVFIGA AGDGKIASAT RADYAAAAAR
VISEAGHEGK VYELAGDSAW TLTQLAAELT KQSGKQVTYQ NLSEADFAAA LKSVGLPDGL
ADMLADSDVG ASKGGLFDNS KTLSKLIGRP TTTLAESVSH LFNVNN