Gene EcSMS35_4689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4689 
Symbol 
ID6144451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4788034 
End bp4788999 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content56% 
IMG OID641619505 
Producthypothetical protein 
Protein accessionYP_001746613 
Protein GI170680592 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.16874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGCG GCGTGCTGTA CGCCCTATTA GCAGGGTTGA TGTGGGGGCT TATTTTTGTC 
GGGCCGTTGA TCGTGCCGGA ATACCCGGCG ATGTTGCAGT CGATGGGGCG TTATCTGGCG
TTAGGGTTAA TTGCGCTACC CATTGCCTGG CTGGGACGCG TGCGTCTGCG TCAGTTGGCG
CGTCGCGACT GGCTTACCGC CTTGATGCTC ACTATGATGG GCAACCTCAT CTATTACTTC
TGCCTTGCCA GTGCCATTCA ACGTACTGGC GCGCCTGTTT CCACGATGAT TATCGGCACC
CTGCCGGTGG TGATTCCCGT TTTTGCCAAT CTGCTTTATA GCCAGCGCGA CGGCAAACTC
GCGTGGGGAA AACTCGCCCC GGCACTGATT TGTATTGGCA TCGGCCTGGC GTGTGTGAAT
ATTGCTGAGT TAAACCACGG ACTCCCCGAT TTTGACTGGG CACGTTATAC CTCAGGCATC
GTGCTAGCGT TAGTTTCCGT GGTCTGCTGG GCATGGTATG CCCTGCGCAA CGCCCGCTGG
CTGCGGGAAA ATCCCGACAA ACATCCAATG ATGTGGGCGA CGGCGCAGGC GCTGGTCACG
CTGCCGGTTT CTCTCATCGG CTATCTCGTC GCCTGTTACT GGCTGAATAT GCAAACGCCG
GACTTCTCCT TACCCTTTGG CCCCCGTCCG CTGGTGTTTA TTAGTCTGAT GGTTGCGATA
GCCGTGCTTT GCTCATGGGT TGGCGCACTC TGCTGGAACG TCGCCAGCCA GCGATTACCG
ACAGTGATTC TCGGGCCGCT GATTGTTTTC GAAACGCTGG CAGGTTTGCT GTACACCTTT
TTACTCCGCC AGCAAATGCC GCCGCTAATG ACGCTGAGCG GTATCGCGCT GTTAGTGATT
GGCGTGGTCA TCGCGGTCAG AGCAAAACCA GAAAAACCTT TAACTGAATC TGTCTCAGAA
AGTTGA
 
Protein sequence
MISGVLYALL AGLMWGLIFV GPLIVPEYPA MLQSMGRYLA LGLIALPIAW LGRVRLRQLA 
RRDWLTALML TMMGNLIYYF CLASAIQRTG APVSTMIIGT LPVVIPVFAN LLYSQRDGKL
AWGKLAPALI CIGIGLACVN IAELNHGLPD FDWARYTSGI VLALVSVVCW AWYALRNARW
LRENPDKHPM MWATAQALVT LPVSLIGYLV ACYWLNMQTP DFSLPFGPRP LVFISLMVAI
AVLCSWVGAL CWNVASQRLP TVILGPLIVF ETLAGLLYTF LLRQQMPPLM TLSGIALLVI
GVVIAVRAKP EKPLTESVSE S