Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4688 |
Symbol | |
ID | 6146196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4787264 |
End bp | 4787926 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641619504 |
Product | iron-sulfur cluster repair di-iron protein |
Protein accession | YP_001746612 |
Protein GI | 170680284 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG2846] Regulator of cell morphogenesis and NO signaling |
TIGRFAM ID | [TIGR03652] iron-sulfur cluster repair di-iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.041656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTATC GCGACCAACC TTTAGGTGAA CTGGCGCTCT CTATTCCTCG CGCTTCGGCT CTGTTTCGTA AATATGATAT GGATTACTGC TGTGGCGGTA AGCAGACGCT GGCGCGCGCG GCGGCACGTA AAGAACTGGA TGTTGACGTC ATTGAAGCCG AACTGGCAAA GCTTGCTGAA CAACCGATTG AGAAAGACTG GCGTAGCGCC CCGCTGGCGG AAATCATCGA CCACATTATT GTGCGCTATC ACGATCGCCA TCGCGAGCAG CTGCCGGAGC TGATCCTGCA AGCGACTAAA GTCGAGCGCG TTCACGCCGA CAAACCAAGT GTGCCAAAAG GGCTGACAAA ATACCTGACT ATGCTGCATG AAGAGCTTTC CAGCCATATG ATGAAAGAAG AGCAAATTCT CTTCCCGATG ATCAAACAAG GCATGGGCAG CCAGGCAATG GGGCCAATCA GCGTAATGGA AAGCGAGCAC GATGAAGCGG GCGAACTGCT GGAAGTGATC AAACACACCA CCAATAACGT CACACCGCCG CCGGAAGCCT GCACCACCTG GAAAGCGATG TATAACGGCA TTAATGAACT GATTGATGAC CTGATGGAGC ACATCAGTCT GGAAAACAAT GTACTATTCC CGCGCGCGCT GGCGGGTGAG TGA
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Protein sequence | MAYRDQPLGE LALSIPRASA LFRKYDMDYC CGGKQTLARA AARKELDVDV IEAELAKLAE QPIEKDWRSA PLAEIIDHII VRYHDRHREQ LPELILQATK VERVHADKPS VPKGLTKYLT MLHEELSSHM MKEEQILFPM IKQGMGSQAM GPISVMESEH DEAGELLEVI KHTTNNVTPP PEACTTWKAM YNGINELIDD LMEHISLENN VLFPRALAGE
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