Gene EcSMS35_4688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4688 
Symbol 
ID6146196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4787264 
End bp4787926 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content53% 
IMG OID641619504 
Productiron-sulfur cluster repair di-iron protein 
Protein accessionYP_001746612 
Protein GI170680284 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2846] Regulator of cell morphogenesis and NO signaling 
TIGRFAM ID[TIGR03652] iron-sulfur cluster repair di-iron protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.041656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTATC GCGACCAACC TTTAGGTGAA CTGGCGCTCT CTATTCCTCG CGCTTCGGCT 
CTGTTTCGTA AATATGATAT GGATTACTGC TGTGGCGGTA AGCAGACGCT GGCGCGCGCG
GCGGCACGTA AAGAACTGGA TGTTGACGTC ATTGAAGCCG AACTGGCAAA GCTTGCTGAA
CAACCGATTG AGAAAGACTG GCGTAGCGCC CCGCTGGCGG AAATCATCGA CCACATTATT
GTGCGCTATC ACGATCGCCA TCGCGAGCAG CTGCCGGAGC TGATCCTGCA AGCGACTAAA
GTCGAGCGCG TTCACGCCGA CAAACCAAGT GTGCCAAAAG GGCTGACAAA ATACCTGACT
ATGCTGCATG AAGAGCTTTC CAGCCATATG ATGAAAGAAG AGCAAATTCT CTTCCCGATG
ATCAAACAAG GCATGGGCAG CCAGGCAATG GGGCCAATCA GCGTAATGGA AAGCGAGCAC
GATGAAGCGG GCGAACTGCT GGAAGTGATC AAACACACCA CCAATAACGT CACACCGCCG
CCGGAAGCCT GCACCACCTG GAAAGCGATG TATAACGGCA TTAATGAACT GATTGATGAC
CTGATGGAGC ACATCAGTCT GGAAAACAAT GTACTATTCC CGCGCGCGCT GGCGGGTGAG
TGA
 
Protein sequence
MAYRDQPLGE LALSIPRASA LFRKYDMDYC CGGKQTLARA AARKELDVDV IEAELAKLAE 
QPIEKDWRSA PLAEIIDHII VRYHDRHREQ LPELILQATK VERVHADKPS VPKGLTKYLT
MLHEELSSHM MKEEQILFPM IKQGMGSQAM GPISVMESEH DEAGELLEVI KHTTNNVTPP
PEACTTWKAM YNGINELIDD LMEHISLENN VLFPRALAGE