| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4685 |
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| Symbol | cycA |
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| ID | 6146330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4782999 |
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| End bp | 4784402 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641619501 |
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| Product | D-alanine/D-serine/glycine permease |
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| Protein accession | YP_001746609 |
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| Protein GI | 170682794 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000407821 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGATC AGGTAAAAGT CGTTGCCGAT GATCAGGCTC CGGCTGAACA GTCGCTACGG
CGCAATCTCA CAAACCGACA TATTCAGCTT ATTGCCATTG GCGGTGCCAT TGGTACAGGG
TTGTTTATGG GGTCCGGCAA AACGATTAGC CTTGCCGGGC CGTCGATCAT TTTCGTTTAT
ATGATCATCG GTTTTATGCT CTTTTTCGTG ATGCGGGCAA TGGGGGAATT GCTGCTTTCG
AATCTGGAAT ACAAATCTTT TAGTGACTTC GCTTCCGATT TACTCGGGCC GTGGGCAGGA
TATTTCACCG GCTGGACTTA CTGGTTCTGC TGGGTTGTAA CCGGTATGGC AGACGTGGTT
GCCATTACCG CCTATGCGCA ATTCTGGTTC CCTGGGCTTT CTGACTGGGT TGCTTCGTTA
TCCGTGATCA TTCTGTTACT GGTTCTAAAC CTCGCCACGG TAAAAATGTT CGGTGAGATG
GAGTTCTGGT TTGCGATGAT CAAAATCGTC GCCATCGTGT CGCTGATTGT TGTCGGCCTG
GTCATGGTGG CGATGCACTT TCAGTCACCG ACCGGTGTGG AAGCATCATT TGCACATTTG
TGGAATGACG GCGGCTGGTT CCCGAAAGGC TTAAGTGGCT TCTTTGCTGG ATTCCAGATA
GCGGTTTTCG CTTTCGTAGG GATTGAGCTG GTAGGTACCA CCGCTGCGGA AACCAAAGAT
CCAGAGAAAT CACTGCCACG CGCGATTAAC TCCATTCCGA TCCGTATCAT TATGTTCTAC
GTCTTCTCGC TGATTGTGAT TATGTCCGTG ACGCCGTGGA GTTCGGTAGT CCCGGAGAAA
AGCCCGTTCG TTGAACTGTT TGTGTTGGTA GGTTTGCCTG CGGCTGCCAG CGTGATCAAC
TTTGTGGTGC TGACCTCTGC GGCGTCTTCC GCTAACAGCG GTGTCTTCTC TACCAGCCGT
ATGCTGTTTG GTCTGGCCCA GGAAGGTGTG GCACCGAAAG CGTTCGCTAA ACTCTCTAAG
CGCGCAGTAC CCGCGAAAGG GCTGACCTTC TCTTGTATCT GTCTGCTCGG CGGCGTGGTG
ATGTTGTATG TGAATCCCAG CGTGATTGGC GCGTTCACGA TGATTACAAC CGTTTCCGCG
ATTCTGTTTA TGTTTGTCTG GACGATTATC CTTTGCTCGT ACCTGGTGTA TCGCAAACAG
CGTCCTCATC TGCATGAGAA GTCGATCTAC AAGATGCCAC TCGGCAAGCT GATGTGCTGG
GTATGTATGG CGTTCTTTGT GTTTGTTCTG GTGTTGTTGA CACTGGAAGA TGACACCCGC
CAGGCGCTGC TGGTTACCCC GCTGTGGTTT ATCGCGCTGG GGCTGGGCTG GCTGTTTATT
GGTAAAAAAC GCATGGCGAA GTAA
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| Protein sequence | MVDQVKVVAD DQAPAEQSLR RNLTNRHIQL IAIGGAIGTG LFMGSGKTIS LAGPSIIFVY
MIIGFMLFFV MRAMGELLLS NLEYKSFSDF ASDLLGPWAG YFTGWTYWFC WVVTGMADVV
AITAYAQFWF PGLSDWVASL SVIILLLVLN LATVKMFGEM EFWFAMIKIV AIVSLIVVGL
VMVAMHFQSP TGVEASFAHL WNDGGWFPKG LSGFFAGFQI AVFAFVGIEL VGTTAAETKD
PEKSLPRAIN SIPIRIIMFY VFSLIVIMSV TPWSSVVPEK SPFVELFVLV GLPAAASVIN
FVVLTSAASS ANSGVFSTSR MLFGLAQEGV APKAFAKLSK RAVPAKGLTF SCICLLGGVV
MLYVNPSVIG AFTMITTVSA ILFMFVWTII LCSYLVYRKQ RPHLHEKSIY KMPLGKLMCW
VCMAFFVFVL VLLTLEDDTR QALLVTPLWF IALGLGWLFI GKKRMAK
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