Gene EcSMS35_4679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4679 
Symbol 
ID6143301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4777945 
End bp4778721 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content49% 
IMG OID641619495 
Productenoyl-CoA hydratase/isomerase family protein 
Protein accessionYP_001746603 
Protein GI170682441 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.234424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACC AACCCGTTCT GTTCAGCAGA GCGGCGGCTT CTTGCCGCCT GACATTGAAC 
CGTGAAGATA AATGTCATGC TATTAATGAA GAAATGATCG AATCTCTCGA CCATTATTTA
AATGAAATTG AAAACGACAC CACATTACGA TTAGTCGAAT TAACGGCAAC CGGCGATAAA
TTCTTTTGTG CAGGCGGCGA TATTAAATCG TGGTCAGCCT ATTCGCCATT AGATATGGGC
AGAAAATGGA TTAAACGCGG CAATGACGTT TTTAATCGCC TGCGCAATTT ACCTCAATTA
ACGGTTGCGA ATCTCAACGG TCATACCATC GGCGGTGGTA TTGAACTTGC CTTGTGCTGC
GATATTCGTA TTGCTCGCCC CAGCGCGAAA TTCTCTAATC CGGAAGTAAT GCTCGGCATG
GTGCCTGGCT GGATGGGCAT TGAACGCGTG CTTAATCAGG TCGGTCCGGT GGTCGGTCGC
CAGATGCTGA TGCTGGGTAA ACGCCTGACG GCGCAGGAAG CTCAGGCGGC GAATTTAATT
GATGAAGTGG TAGAAAAAGA ACAGGTGGAA AGCTGGATGG CGAATCAGTT AGCGCAGCTG
GAAAAATGTG GTCCGGTGGC GCTTGCACAT ATTAAGCAAC TGATTCTGGC ACTGGAAAAT
AAACATGCCG ATTACCCGCA CCAGCTACTG GCCGGATTAA TGTCCGCCAC TCAGGATTGC
CAGCAGGCGA CGCGCGCCTT TGCCGAAAAA AGTAGCGTGA GCTTCCATAA TCAATAA
 
Protein sequence
MSDQPVLFSR AAASCRLTLN REDKCHAINE EMIESLDHYL NEIENDTTLR LVELTATGDK 
FFCAGGDIKS WSAYSPLDMG RKWIKRGNDV FNRLRNLPQL TVANLNGHTI GGGIELALCC
DIRIARPSAK FSNPEVMLGM VPGWMGIERV LNQVGPVVGR QMLMLGKRLT AQEAQAANLI
DEVVEKEQVE SWMANQLAQL EKCGPVALAH IKQLILALEN KHADYPHQLL AGLMSATQDC
QQATRAFAEK SSVSFHNQ