| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4676 |
|---|
| Symbol | |
|---|
| ID | 6144007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4773819 |
|---|
| End bp | 4774295 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641619492 |
|---|
| Product | TRAP transporter, DctQ-like membrane protein |
|---|
| Protein accession | YP_001746600 |
|---|
| Protein GI | 170680904 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAATA TAATTAGATC TATTAATGCT CTGCTTGCAA CATTGAATAT TACCATTTTG
GCGATCATTG TGGCATGTGT GACATGGCAA GTGGTAGCAC GATTTATATT TAAAAGCCCC
AGTATATTTA CGGATGAACT CAGTCGTTTG CTTTTTATTT GCCTTGGCCT TTTTGGTGGT
GCCTATACCG CGGGGCAGAA CCGGCATCTG GCGATTGATC TGCTTCCTAT GATGCTGAAA
GGAAAAGCCC GGCGTCATTT ATTTTTGTGT ATTCAGATTA TCGTTATTAT CTTCTCTACC
ATCATTATGG TATATGGTGG TGGGCTATTA ACGCTGGACA CATTCGATTC AGGTCAAACC
TCACCCGCTT TAGGCTGGCA GATGGGATAT ATCTATATGA GTATCCCGAT TAGTGGTGTT
CTTATTATTA TATACACCAT AGATATGGTT TTAACAGAAC TTAAACAACC ACTCTAA
|
|---|
| Protein sequence | MRNIIRSINA LLATLNITIL AIIVACVTWQ VVARFIFKSP SIFTDELSRL LFICLGLFGG
AYTAGQNRHL AIDLLPMMLK GKARRHLFLC IQIIVIIFST IIMVYGGGLL TLDTFDSGQT
SPALGWQMGY IYMSIPISGV LIIIYTIDMV LTELKQPL
|
|---|
| |