| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4675 |
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| Symbol | |
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| ID | 6145560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4772475 |
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| End bp | 4773776 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641619491 |
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| Product | TRAP transporter, DctM subunit |
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| Protein accession | YP_001746599 |
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| Protein GI | 170679845 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTACT GGTTACCGAT TATTGTGTTA TTTGGTGCCT TCTTTTTTAT GTTGGCATTA
GGTGTACCTA TTGTTTATGC CATTGGTTTA TCCACACTGG CATCAATTTC CACACAACTC
GATTTCAACT CAGCATTGAG TGTGGTTTCC CAAAAGTTAG CCTCCGGGTT AGATAGCTTT
ACATTATTGG CAATTCCATT TTTTATTTTG TCTGGCAACA TTATGAATCA TGGAGGAATA
GCGCGACGAT TAATCAACTT TGCCAGAATT CTTGGCGGTC GACTGCCTGG CTCACTTGCT
CACTGTAATA TTCTTGCCAA TATGCTGTTC GGGGCAATTT CTGGTTCAGC TGTTGCTTCG
GCGGCTGCGA TGGGCGGCGT CATGCATCCG CAACAGGTTA AAGAGGGCTA CGACCCGGCA
TTCAGTACTG CGGTTAACGT TGCCTCTGCC CCGACGGGTT TGCTTATTCC ACCAAGTAAT
ACGTTAATCG TCTATTCACT GGTCAGTGGT GGTACTTCTA TTGCCGCACT GTTCCTGGCG
GGTTATGTTC CGGGAATTTT GCTGGGTCTG GCACTGATGG TAATAGCCGG TATTATCGCG
GTACGTCGCG GTTATCCAAA GCCAGAACGC CCGACTTTAC GCCAGGCTGG CGTTGCGATA
TGGATGGCTA TCCCCAGTAT TTTCCTGATT ATTTTAATTA TGGGGGGTGT ATTAAGTGGT
ATTTTTACCC CGACAGAGGC CTCCGCAATT GCAGTAATTT ATACCCTTTT CCTTGCACTG
GTTCTTTATC GTGAAATCTC AGTTAAAGAT TTACCTAAAA TATTTCTGGA ATCCGTTATT
ACCACTGCAA TTGTCTTGTT ATTAATTGGT TCTTCGATGG GAATGTCATG GGCGATGTCA
AACGCTGACG TTCCCTTCCT GATTCTCGAT TTGCTTAACA CTATTTCTGA CAACCCAATA
ATAATCCTGC TTATTATCAA TATTATCCTG TTGATTATCG GCACTTTTAT GGATATGACA
CCGGCGGTAC TGATTTTTAC GCCGATATTT TTACCGGTTG TCACCGAACT GGGCATGGAC
CCGATTCACT TTGGTATTGT CATGGTACTG AACATGTGTA TCGGTATTTG TACTCCGCCT
GTAGGCAGTG TGTTATTTGT CGGTTGTAGT GTATCTAAAT TACCGATTAA TAAAATTATC
AAACCTATGC TGCCATTTTA TGCCGTGATG GTATTGGTGC TGGCAATGGT GACCTATATT
CCGCAAATCA GTATGGCATT GCCAAGAGCA CTGGGTTACT GA
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| Protein sequence | MDYWLPIIVL FGAFFFMLAL GVPIVYAIGL STLASISTQL DFNSALSVVS QKLASGLDSF
TLLAIPFFIL SGNIMNHGGI ARRLINFARI LGGRLPGSLA HCNILANMLF GAISGSAVAS
AAAMGGVMHP QQVKEGYDPA FSTAVNVASA PTGLLIPPSN TLIVYSLVSG GTSIAALFLA
GYVPGILLGL ALMVIAGIIA VRRGYPKPER PTLRQAGVAI WMAIPSIFLI ILIMGGVLSG
IFTPTEASAI AVIYTLFLAL VLYREISVKD LPKIFLESVI TTAIVLLLIG SSMGMSWAMS
NADVPFLILD LLNTISDNPI IILLIINIIL LIIGTFMDMT PAVLIFTPIF LPVVTELGMD
PIHFGIVMVL NMCIGICTPP VGSVLFVGCS VSKLPINKII KPMLPFYAVM VLVLAMVTYI
PQISMALPRA LGY
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