| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4674 |
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| Symbol | |
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| ID | 6144848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4771451 |
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| End bp | 4772422 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641619490 |
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| Product | TRAP transporter solute receptor DctP family protein |
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| Protein accession | YP_001746598 |
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| Protein GI | 170681376 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.841471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA AAGTATCCGC TGGCATTATC GGTGCTGTTC TTATGTTATC CGCAAGCCAG
TCCTGGGCAG TGACATTAAA ACTGAGTCAT AATCAGGATA AGTCTCATCC TGTTCATAAA
GCGATGGAGT TCTTTGCGAA AAAGAGCAAA GAGTACTCTA ACGGTGATAT TACTATTCGT
ATTTATCCAA ATGGAACATT GGGTACTCAA CGAGAAACAA TGGAGCTGAT TCGTTCTGGC
GCTATTCCAC TGGTAAAAAC CAACGCGGCA GAAATGGAAG CATTTGAAAA TTCCTATAAA
TTATTTAGCC TGCCTTATTT GTTCCGCGAT CGTGATCATT ATTATCAGGT CATGCAGGGC
GATATCGGGA GAAAAATCCT CGACTCAACG AAAAGCAAAG GTTATTTCGG GCTGACTTTT
TATGATGGAG GCGCCCGCAG TTTCTACGGC AATAAACCAG TACTGAAACC AGACGATCTC
AAAGGCATGA AAGTCCGTGT CCAGCCAAGT CCTGGCGCAG TTGAAATGAT CAAAGTCATG
GGCGGTAACC CGACGCCACT GGATTACGGC GAGTTGTATA CAGCCTTACA GCAGGGTGTG
GTCGATATGG CAGAAAACAG CGTGATGGCG CTGACCACCA TGCGTCACGG TGAAGTGGCA
AAATCCTTCA GCCTTGACGA ACACACTATG GTTCCCGATG TGGTTCTGAT GAGCAATGCT
GCGTTTGATA AACTTAGCCC GGAAAATCAG GCAGTTATAT TAAAAGCAGC TAAAGAATCA
ATGAGCTACA TGAAAGACTT GTGGAGCGAG GAAGAGAAAC AAGAATTTGC AAAACTGGAT
AAAATGGGCG TGAAAGTCTA CCAGGTAGAT AAAGCTCCGT TTATCGAGAA AGTACAGCCA
ATGTACGCAA ACTTCGCTAA GGACAACCCA GCCCTTGCCC CAATGCTGGC TGATATTCAG
GCAGCTAAGT AA
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| Protein sequence | MKIKVSAGII GAVLMLSASQ SWAVTLKLSH NQDKSHPVHK AMEFFAKKSK EYSNGDITIR
IYPNGTLGTQ RETMELIRSG AIPLVKTNAA EMEAFENSYK LFSLPYLFRD RDHYYQVMQG
DIGRKILDST KSKGYFGLTF YDGGARSFYG NKPVLKPDDL KGMKVRVQPS PGAVEMIKVM
GGNPTPLDYG ELYTALQQGV VDMAENSVMA LTTMRHGEVA KSFSLDEHTM VPDVVLMSNA
AFDKLSPENQ AVILKAAKES MSYMKDLWSE EEKQEFAKLD KMGVKVYQVD KAPFIEKVQP
MYANFAKDNP ALAPMLADIQ AAK
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