| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4646 |
|---|
| Symbol | hflC |
|---|
| ID | 6146834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4748082 |
|---|
| End bp | 4749086 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641619462 |
|---|
| Product | FtsH protease regulator HflC |
|---|
| Protein accession | YP_001746570 |
|---|
| Protein GI | 170683296 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01932] HflC protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.175793 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAGT CAGTTATCGC GATTATCATC ATCGTGCTGG TAGTGCTTTA CATGTCTGTC
TTTGTCGTCA AAGAAGGTGA GCGCGGTATT ACGCTGCGTT TTGGTAAGGT ACTGCGTGAC
GATGACAACA AACCTCTGGT TTATGAGCCG GGTCTGCATT TCAAGATACC GTTCATTGAA
ACGGTGAAAA TGCTCGACGC ACGTATTCAG ACCATGGACA ACCAGGCCGA CCGCTTTGTG
ACCAAAGAGA AGAAAGACCT GATCGTCGAC TCTTACATCA AATGGCGCAT CAGCGATTTC
AGCCGTTACT ACCTGGCAAC GGGCGGTGGC GACATTTCGC AAGCGGAAGT GCTGTTGAAA
CGTAAGTTCT CTGACCGTCT GCGTTCTGAA ATTGGTCGCC TGGACGTGAA AGACATCGTC
ACCGATTCCC GTGGTCGTCT GACCCTCGAA GTACGTGACG CGCTGAACTC CGGTTCTGCG
GGTACAGAAG ATGAAGTTAC TACCCCGGCG GCAGATAACG CCATTGCCGA AGCGGCAGAG
CGCGTAACGG CTGAGACGAA GGGCAAAGTT CCGGTCATCA ACCCGAACAG TATGGCGGCG
CTGGGTATTG AAGTTGTCGA TGTGCGAATT AAGCAGATCA ACCTGCCGAC CGAAGTGTCT
GAAGCGATCT ACAACCGTAT GCGCGCCGAG CGTGAAGCGG TAGCGCGTCG TCACCGTTCA
CAAGGTCAGG AAGAAGCGGA AAAACTGCGT GCAACTGCCG ACTATGAAGT GACCAGAACG
CTGGCAGAAG CTGAGCGTCA GGGCCGCATC ATGCGCGGTG AAGGCGATGC CGAAGCAGCC
AAACTGTTTG CTGATGCATT CAGTAAAGAT CCGGACTTCT ACGCATTCAT CCGTAGCCTG
CGTGCTTATG AGAACAGCTT CTCTGGCAAT CAGGACGTGA TGGTCATGAG CCCGGACAGC
GATTTCTTCC GCTACATGAA GACGCCGACC TCCGCAACGC GTTAA
|
|---|
| Protein sequence | MRKSVIAIII IVLVVLYMSV FVVKEGERGI TLRFGKVLRD DDNKPLVYEP GLHFKIPFIE
TVKMLDARIQ TMDNQADRFV TKEKKDLIVD SYIKWRISDF SRYYLATGGG DISQAEVLLK
RKFSDRLRSE IGRLDVKDIV TDSRGRLTLE VRDALNSGSA GTEDEVTTPA ADNAIAEAAE
RVTAETKGKV PVINPNSMAA LGIEVVDVRI KQINLPTEVS EAIYNRMRAE REAVARRHRS
QGQEEAEKLR ATADYEVTRT LAEAERQGRI MRGEGDAEAA KLFADAFSKD PDFYAFIRSL
RAYENSFSGN QDVMVMSPDS DFFRYMKTPT SATR
|
|---|
| |