Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4645 |
Symbol | hflK |
ID | 6146160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4746820 |
End bp | 4748079 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641619461 |
Product | FtsH protease regulator HflK |
Protein accession | YP_001746569 |
Protein GI | 170682628 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.14387 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTGGA ATCAGCCCGG TAATAACGGA CAAGACCGCG ACCCGTGGGG AAGCAGCAAA CCTGGCGGCA ACTCTGAGGG AAATGGAAAC AAAGGCGGTC GCGATCAAGG GCCACCTGAT TTAGATGATA TCTTCCGCAA ACTGAGCAAA AAGCTCGGTG GTCTGGGCGG CGGTAAAGGC ACCGGATCTG GCGGTGGCAG TTCATCGCAA GGCCCGCGCC CGCAGCTTGG CGGTCGCGTC GTTACCATCG CAGCGGCAGC GATTGTCATT ATCTGGGCGG CCAGTGGTTT CTATACCATT AAAGAAGCCG AACGCGGCGT GGTAACACGC TTTGGTAAAT TCAGCCATCT GGTTGAGCCG GGTCTGAACT GGAAACCGAC GTTTATCGAC GAAGTCAAAC CGGTGAACGT GGAAGCCGTG CGTGAACTGG CCGCTTCTGG TGTGATGCTG ACGTCGGACG AGAACGTAGT GCGCGTTGAG ATGAACGTGC AGTACCGCGT CACCGATCCG GAAAAATATC TGTATAGCGT GACCAGCCCG GATGACAGTC TGCGTCAGGC TACCGACAGC GCCCTGCGCG GGGTTATCGG TAAATACACC ATGGACCGCA TTCTGACGGA AGGTCGTACC GTGATTCGTA GCGATACTCA GCGCGAACTG GAAGAGACGA TTCGTCCGTA TGATATGGGT ATCACTCTGC TGGACGTCAA CTTCCAGGCA GCTCGTCCGC CGGAAGAAGT AAAAGCGGCG TTTGACGATG CGATTGCCGC GCGTGAAAAC GAACAGCAAT ACATTCGTGA AGCAGAAGCG TATACCAACG AAGTTCAGCC GCGTGCGAAC GGTCAGGCGC AACGTATCCT CGAAGAGGCG CGTGCGTACA AGGCCCAGAC CATCCTGGAA GCTCAGGGTG AAGTGGCGCG CTTTGCTAAA CTTCTGCCGG AATATAAAGC TGCGCCGGAA ATTACTCGCG AGCGTCTGTA TATCGAGACG ATGGAAAAAG TGTTGGGCAA CACCCGCAAA GTGCTGGTTA ACGACAAAGG TGGCAACCTG ATGGTTCTGC CGTTAGACCA GATGCTGAAA GGTGGTAACG CCCCTGCGGC GAAGAGCGAT AACGGTGCCA GCAATCTGCT GCGTCTGCCG CCAGCCTCTT CCTCCACAAC CAGTGGAGCA AGCAACACGT CGTCCACCAG TCAGGGCGAT ATTATGGACC AACGCCGCGC CAACGCGCAG CGTAACGACT ACCAGCGTCA GGGGGAATAA
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Protein sequence | MAWNQPGNNG QDRDPWGSSK PGGNSEGNGN KGGRDQGPPD LDDIFRKLSK KLGGLGGGKG TGSGGGSSSQ GPRPQLGGRV VTIAAAAIVI IWAASGFYTI KEAERGVVTR FGKFSHLVEP GLNWKPTFID EVKPVNVEAV RELAASGVML TSDENVVRVE MNVQYRVTDP EKYLYSVTSP DDSLRQATDS ALRGVIGKYT MDRILTEGRT VIRSDTQREL EETIRPYDMG ITLLDVNFQA ARPPEEVKAA FDDAIAAREN EQQYIREAEA YTNEVQPRAN GQAQRILEEA RAYKAQTILE AQGEVARFAK LLPEYKAAPE ITRERLYIET MEKVLGNTRK VLVNDKGGNL MVLPLDQMLK GGNAPAAKSD NGASNLLRLP PASSSTTSGA SNTSSTSQGD IMDQRRANAQ RNDYQRQGE
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