| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4642 |
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| Symbol | miaA |
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| ID | 6145448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4744034 |
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| End bp | 4744984 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641619458 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001746566 |
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| Protein GI | 170681902 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0706879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATA TCAGTAAGGC GAGCCTGCCT AAGGCGATTT TTTTGATGGG GCCGACGGCC
TCCGGTAAAA CGGCGTTAGC CATTGAGCTG CGTAAAATTT TACCAGTAGA GTTGATAAGC
GTTGATTCTG CCCTTATTTA CAAAGGGATG GATATCGGGA CGGCGAAGCC GAACGCTGAA
GAGTTACTCG CCGCGCCGCA CCGATTGCTG GATATTCGCG ATCCGTCGCA GGCTTACTCG
GCTGCTGATT TTCGCCGCGA TGCGCTGGCG GAAATGGCCG ATATCACCGC GGCGGGGCGG
ATCCCACTGT TAGTGGGCGG TACGATGTTG TATTTCAAGG CATTGCTGGA AGGGTTGTCG
CCGCTACCGT CGGCAGACCC GGAAGTGCGG GCCAGAATTG AGCAACAGGC GGCAGAGCAA
GGTTGGGAGT CATTGCATCG TCAACTTCAG GAGATCGATC CGGTTGCGGC AGCAAGGATT
CATCCAAATG ATCCACAAAG GCTTTCCCGG GCACTGGAAG TTTTTTTCAT TTCGGGTAAA
ACTTTAACGG AACTGACGCA AACGTCAGGA GACGCTCTAC CGTATCAGGT GCATCAGTTC
GCCATCGCCC CGGCGAGCCG TGAACTGCTC CATCAACGAA TTGAGCAGCG TTTTCATCAG
ATGTTGGCTT CAGGTTTTGA AGCAGAAGTC CGGGCGCTTT TTGCCCGAGG AGATTTGCAT
ACGGATTTGC CTTCCATTCG TTGCGTGGGT TATCGCCAGA TGTGGTCTTA CCTTGAAGGC
GAAATCTCAT ACGATGAAAT GGTTTATCGA GGTGTTTGCG CCACGAGACA GTTGGCGAAG
CGGCAGATAA CCTGGCTGCG TGGTTGGGAA GGGGTTCACT GGCTTGACAG TGAAAAACCA
GAACAAGCGC GTGACGAAGT ATTACAGGTT GTTGGTGCTA TCGCAGGCTG A
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| Protein sequence | MSDISKASLP KAIFLMGPTA SGKTALAIEL RKILPVELIS VDSALIYKGM DIGTAKPNAE
ELLAAPHRLL DIRDPSQAYS AADFRRDALA EMADITAAGR IPLLVGGTML YFKALLEGLS
PLPSADPEVR ARIEQQAAEQ GWESLHRQLQ EIDPVAAARI HPNDPQRLSR ALEVFFISGK
TLTELTQTSG DALPYQVHQF AIAPASRELL HQRIEQRFHQ MLASGFEAEV RALFARGDLH
TDLPSIRCVG YRQMWSYLEG EISYDEMVYR GVCATRQLAK RQITWLRGWE GVHWLDSEKP
EQARDEVLQV VGAIAG
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