| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4640 |
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| Symbol | amiB |
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| ID | 6143598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4740847 |
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| End bp | 4742184 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641619456 |
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| Product | N-acetylmuramoyl-l-alanine amidase II |
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| Protein accession | YP_001746564 |
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| Protein GI | 170680514 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.4247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0772035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTATC GCATCAGAAA TTGGTTGGTA GCGACGTTGC TGCTGCTGTG CGCGCAGGTG
GGTGCCGCGA CGCTCTCTGA TATTCAGGTT TCTAACGGCA ACCAACAGGC GCGGATAACG
TTGAGTTTTA TTGGCGATCC TGATTATGCG TTTAGCCATC AAAGCAAACG CATCGTGGCG
CTCGATATCA AACAAACGGG CGTGATTCAG GGACTGCCGT TGTTGTTCAG CGGCAATAAT
CTGGTGAAGG CGATTCGCTC TGGAACGCCT AAAGATGCAC AAACGCTACG GCTGGTGGTC
GATCTTACCG AAAATGGTAA AACCGAAGCG GTGAAGCGGC AGAATGGCAG CAATTACACT
GTCGTCTTTA CGATTAACGC CGATGCGCCG CCACCGCCTC CTCCGCCGCC TGTGGTTGCG
AAACGCGTTG AAACGCCTGC GGTTGGCGCA CCGCGCGTCA GCGAACCGGC GCGCAATCCG
TTTAAAACGG AAAGTAACCG CACTACGGGT GTTATCAGCA GTAATACGGT AACGCGTCCG
GCAGCGCGCG CGACGGCTAA CACTGGCGAT AAAATTATCA TCGCTATTGA TGCCGGACAC
GGCGGTCAGG ATCCTGGCGC TATCGGCCCC GGTGGTACGC GGGAGAAAAA TGTCACCATC
GCCATCGCAC GTAAATTACG TACTTTGCTC AATGACGATC CAATGTTTAA AGGCGTTTTA
ACCCGTGACG GGGATTACTT TATTTCGGTG ATGGGGCGCA GCGATGTGGC ACGTAAGCAA
AACGCCAATT TCCTCGTGTC GATTCACGCT GATGCCGCAC CAAACCGCAG TGCGACTGGC
GCTTCCGTAT GGGTGCTCTC TAACCGTCGT GCAAACAGCG AGATGGCAAG CTGGCTGGAA
CAGCATGAGA AACAGTCGGA GCTACTGGGC GGAGCGGGCG ATGTGCTGGC GAACAGTCAG
TCTGACCCCT ATTTGAGCCA GGCGGTGCTG GATTTACAGT TCGGTCATTC CCAGCGGGTA
GGGTATGATG TAGCGACCAG TATGATCAGT CAGTTGCAAC GCATTGGCGA AATTCATAAA
CGTCGACCAG AACACGCCAG CCTTGGCGTT CTGCGTTCGC CGGATATCCC ATCAGTACTG
GTCGAAACCG GTTTTATCAG CAACAACAGC GAAGAACGTT TGCTGGCGAG CGACGATTAC
CAACAACAGC TGGCAGAAGC CATTTATAAA GGTCTGCGCA ATTATTTCCT TGCGCATCCG
ATGCAATCTG CGCCGCAGGG TGCAACGGCA CAAACTGCCA GTACGGTGAC GACGCCAGAT
CGTACGCTGC CAAACTAA
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| Protein sequence | MMYRIRNWLV ATLLLLCAQV GAATLSDIQV SNGNQQARIT LSFIGDPDYA FSHQSKRIVA
LDIKQTGVIQ GLPLLFSGNN LVKAIRSGTP KDAQTLRLVV DLTENGKTEA VKRQNGSNYT
VVFTINADAP PPPPPPPVVA KRVETPAVGA PRVSEPARNP FKTESNRTTG VISSNTVTRP
AARATANTGD KIIIAIDAGH GGQDPGAIGP GGTREKNVTI AIARKLRTLL NDDPMFKGVL
TRDGDYFISV MGRSDVARKQ NANFLVSIHA DAAPNRSATG ASVWVLSNRR ANSEMASWLE
QHEKQSELLG GAGDVLANSQ SDPYLSQAVL DLQFGHSQRV GYDVATSMIS QLQRIGEIHK
RRPEHASLGV LRSPDIPSVL VETGFISNNS EERLLASDDY QQQLAEAIYK GLRNYFLAHP
MQSAPQGATA QTASTVTTPD RTLPN
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