Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4631 |
Symbol | psd |
ID | 6146767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4734054 |
End bp | 4735022 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641619447 |
Product | phosphatidylserine decarboxylase |
Protein accession | YP_001746558 |
Protein GI | 170682986 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00179779 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.0733814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTAAATT CATTTAAACT TTCGCTACAG TACATTCTGC CGAAACTATG GCTTACTCGC CTGGCGGGTT GGGGCGCAAG CAAGCGGGCA GGATGGCTGA CAAAACTGGT TATCGATCTG TTCGTTAAAT ACTACAAGGT CGACATGAAA GAGGCGCAAA AGCCGGATAC CGCCAGCTAC CGCACCTTTA ACGAATTCTT TGTCCGTCCG CTGCGTGACG AAGTACGCCC AATCGATACC GATCCGAATG TACTGGTTAT GCCTGCCGAT GGCGTTATCA GCCAGTTGGG TAAAATCGAA GAAGATAAAA TCCTGCAAGC CAAAGGCCAC AACTACAGCC TCGAAGCCCT GCTGGCAGGC AACTATCTGA TGGCGGACCT GTTCCGCAAC GGTACGTTTG TGACCACTTA CCTCTCCCCG CGTGACTACC ACCGCGTACA CATGCCGTGC AACGGTATTC TGCGTGAGAT GATCTACGTG CCGGGCGATC TCTTCTCCGT TAACCATCTC ACCGCTCAGA ACGTGCCGAA TCTGTTTGCC CGTAACGAAC GCGTGATCTG CCTGTTCGAT ACCGAATTTG GCCCAATGGC GCAGATTCTG GTCGGGGCGA CGATTGTAGG CAGCATTGAG ACGGTCTGGG CGGGCACCAT TACGCCGCCG CGCGAAGGTA TCATCAAGCG CTGGACCTGG CCTGCCGGGG AAAACGACGG TTCTGTGGCA CTGCTGAAAG GCCAGGAAAT GGGTCGCTTT AAACTCGGTT CCACCGTTAT CAACCTGTTT GCACCGGGTA AAGTGAATCT GGTTGAGCAA CTGGAAAGCC TGTCTGTCAC GAAAATTGGC CAGCCGCTGG CAGTATCTAC CGAAACCTTT GTTACGCCAG ACGCTGAACC CGCCCCGCTT CCTGCTGAAG AGATCGAAGC AGAACACGAC GCCAGCCCAT TGGTTGACGA CAAAAAAGAC CAGGTCTAA
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Protein sequence | MLNSFKLSLQ YILPKLWLTR LAGWGASKRA GWLTKLVIDL FVKYYKVDMK EAQKPDTASY RTFNEFFVRP LRDEVRPIDT DPNVLVMPAD GVISQLGKIE EDKILQAKGH NYSLEALLAG NYLMADLFRN GTFVTTYLSP RDYHRVHMPC NGILREMIYV PGDLFSVNHL TAQNVPNLFA RNERVICLFD TEFGPMAQIL VGATIVGSIE TVWAGTITPP REGIIKRWTW PAGENDGSVA LLKGQEMGRF KLGSTVINLF APGKVNLVEQ LESLSVTKIG QPLAVSTETF VTPDAEPAPL PAEEIEAEHD ASPLVDDKKD QV
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