| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4627 |
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| Symbol | |
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| ID | 6143335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4728446 |
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| End bp | 4729990 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641619443 |
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| Product | amino acid permease family protein |
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| Protein accession | YP_001746554 |
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| Protein GI | 170680322 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.592733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.0531629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGCGT TTTATACACG CGCTGAAATG AAGGATGGTT TCATGCCTCA CACGATAAAA
AAGATGAGTC TGATAGGACT CATATTGATG ATCTTTACTT CCGTATTTGG ATTTGCCAAT
AGCCCATCGG CTTATTACTT AATGGGTTAT AGTGCGATTC CCTTTTATAT ATTTTCTGCA
TTGTTATTCT TTATTCCATT CGCCTTAATG ATGGCTGAAA TGGGAGCGGC TTATCGCAAA
GAAGAAGGTG GTATCTATTC CTGGATGAAT AATAGTGTCG GACCACGTTT TGCCTTCATT
GGTACATTTA TGTGGTTTTC CTCTTATATC ATCTGGATGG TGAGTACCTC AGCGAAAGTT
TGGGTACCGT TCTCAACATT CCTCTATGGT AGCGACATGA CCCAGCACTG GCGTATTGCC
GGACTGGAGC CTACGCAGGT GGTTGGTCTG CTGGCAGTGG CATGGATGAT TCTGGTCACC
GTCGTTGCTT CAAAGGGGAT TAATAAAATT GCCCGCATTA CTGCGGTGGG CGGTATTGCA
GTAATGTGTC TGAATTTAGT ATTGCTGTTA GTAAGCATTA CTATTTTGTT ATTAAATGGT
GGGCATTTCG CGCAGGATAT TAATTTCCTT GCATCACCGA ACCCAGGTTA TCAGTCCGGT
CTGGCAATGC TATCGTTTGT GGTATTTGCT ATTTTTGCCT ATGGCGGAAT TGAAGCGGTG
GGTGGTCTGG TCGATAAAAC GGAAAATCCA GAAAAGAACT TTGCCAAAGG TATTGTTTTT
GCCGCTATTG TTATTTCAAT CGGTTATTCG CTGGCAATAT TTTTATGGGG CGTCAGCACA
AACTGGCAGC AGGTATTAAG TAATGGTTCC GTTAACCTCG GCAATATTAC CTATGTGCTG
ATGAAGAGCC TCGGGGTGAC GCTGGGTAAC GCACTGCATT TTTCACCTGA AGCGTCATTG
TCGCTGGGCG TATGGTTTGC GCGTATTACC GGACTGTCGA TGTTCCTCGC TTATACCGGT
GCGTTCTTTA CGCTTTGCTA TTCACCGCTG AAAGCCATCA TCCAGGGAAC GCCGAAAGCA
TTGTGGCCGG AACCGATGAC GCGCCTGAAT ACGATGGGGA TGCCGTCTAT TGCCATGTGG
ATGCAGTGCG GGTTGGTTAC TATCTTCATT CTGCTGGTTT CGTTTGGTGG CGGTACCGCA
TCGGCGTTCT TTAACAAGCT GACGCTGATG GCGAACGTGT CTATGACGCT TCCTTACCTG
TTCCTCGCGC TGGCTTTCCC ATTTTTTAAA GCACGTCAGG ATCTCGACAG ACCGTTTGTG
ATTTTCAAAA CGCATATGTC GGCAATGATT GCAACAGTGG TTGTCGTACT GGTGGTGACA
TTTGCGAACG TCTTCACCAT CATTCAACCT GTGGTTGAAG CTGGAGACTG GGACAGCACA
TTGTGGATGA TTGGCGGCCC TGTCTTCTTC TCGCTGTTAG CGATGGCGAT TTACCAGAAC
TATTGCAGTC GCATGGCGAA CAAACCTGAG TTAGCTCTCG ACTGA
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| Protein sequence | MGAFYTRAEM KDGFMPHTIK KMSLIGLILM IFTSVFGFAN SPSAYYLMGY SAIPFYIFSA
LLFFIPFALM MAEMGAAYRK EEGGIYSWMN NSVGPRFAFI GTFMWFSSYI IWMVSTSAKV
WVPFSTFLYG SDMTQHWRIA GLEPTQVVGL LAVAWMILVT VVASKGINKI ARITAVGGIA
VMCLNLVLLL VSITILLLNG GHFAQDINFL ASPNPGYQSG LAMLSFVVFA IFAYGGIEAV
GGLVDKTENP EKNFAKGIVF AAIVISIGYS LAIFLWGVST NWQQVLSNGS VNLGNITYVL
MKSLGVTLGN ALHFSPEASL SLGVWFARIT GLSMFLAYTG AFFTLCYSPL KAIIQGTPKA
LWPEPMTRLN TMGMPSIAMW MQCGLVTIFI LLVSFGGGTA SAFFNKLTLM ANVSMTLPYL
FLALAFPFFK ARQDLDRPFV IFKTHMSAMI ATVVVVLVVT FANVFTIIQP VVEAGDWDST
LWMIGGPVFF SLLAMAIYQN YCSRMANKPE LALD
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