| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4625 |
|---|
| Symbol | frdA |
|---|
| ID | 6143920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4725159 |
|---|
| End bp | 4726967 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641619441 |
|---|
| Product | fumarate reductase flavoprotein subunit |
|---|
| Protein accession | YP_001746552 |
|---|
| Protein GI | 170680383 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | [TIGR01176] fumarate reductase, flavoprotein subunit
[TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0290793 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAACCT TTCAAGCCGA TCTTGCCATT GTAGGCGCCG GTGGCGCGGG ATTACGTGCT
GCAATTGCTG CCGCGCAGGC AAATCCAAAT GCAAAAATCG CACTAATCTC AAAAGTATAC
CCGATGCGTA GCCATACCGT TGCTGCAGAA GGGGGCTCCG CCGCTGTCGC GCAGGATCAT
GACAGCTTCG AATATCACTT TCACGATACA GTAGCGGGTG GCGACTGGTT GTGTGAGCAG
GATGTCGTGG ATTATTTCGT CCACCACTGC CCAACCGAAA TGACCCAACT GGAACTGTGG
GGATGCCCAT GGAGCCGTCG CCCGGATGGT AGCGTCAACG TACGTCGCTT CGGCGGCATG
AAAATCGAGC GTACCTGGTT CGCCGCCGAT AAGACCGGCT TCCATATGCT GCACACGCTG
TTCCAGACCT CTCTGCAATT CCCGCAGATC CAGCGTTTTG ACGAACATTT CGTGCTGGAT
ATTCTGGTTG ATGATGGTCA TGTTCGCGGC CTGGTAGCAA TGAACATGAT GGAAGGCACG
CTGGTGCAGA TCCGTGCTAA CGCGGTCGTT ATGGCTACCG GCGGTGCGGG TCGCGTTTAT
CGTTACAACA CCAACGGCGG CATCGTTACC GGTGACGGTA TGGGTATGGC GCTAAGCCAC
GGCGTTCCGC TGCGTGACAT GGAATTCGTT CAGTATCACC CAACCGGTCT ACCAGGTTCC
GGTATCCTGA TGACCGAAGG CTGCCGCGGT GAAGGTGGTA TTCTGGTCAA CAAAAATGGC
TACCGTTATC TGCAAGATTA CGGCATGGGC CCGGAAACTC CGCTGGGCGA GCCGAAAAAC
AAATATATGG AACTGGGTCC ACGCGACAAA GTTTCTCAGG CCTTCTGGCA CGAATGGCGT
AAAGGCAACA CCATCTCCAC GCCACGTGGC GATGTGGTTT ATCTCGACCT GCGTCACCTC
GGCGAGAAAA AACTGCATGA ACGTCTGCCG TTCATCTGCG AACTGGCGAA AGCGTACGTT
GGCGTCGATC CGGTTAAAGA ACCGATTCCG GTACGTCCGA CCGCACACTA CACCATGGGT
GGTATCGAAA CCGATCAGAA CTGTGAAACC CGCATTAAAG GTCTGTTCGC CGTGGGTGAA
TGTTCCTCTG TTGGTCTGCA CGGTGCGAAC CGTCTGGGCT CCAACTCGCT GGCGGAACTG
GTGGTCTTCG GTCGTCTGGC CGGTGAGCAA GCTATGGAAC GCGCATCTAC TGCCGGTAAT
GGCAACGATG CAGCAATCAA TGCTCAGGTT GCTGGCGTTG AACAGCGCCT GAAAGATCTG
GTTAACCAGG ATGGCGGCGA AAACTGGGCT AAGATCCGCG ACGAAATGGG CATGGCCATG
GAAGAAGGCT GCGGTATCTA CCGTACGCCA GAACTGATGC AGAAAACCAT CGACAAGCTG
GCAGAATTGC AGGAACGCTT CAAGCGCGTG CGCATCACCG ACACTTCCAG CGTGTTCAAC
ACCGACCTGC TCTACACCAT TGAACTGGGT CACGGTCTGA ACGTTGCTGA ATGTATGGCG
CACTCCGCAA TGGCACGTAA AGAGTCTCGC GGCGCGCACC AGCGTCTGGA CGAAGGTTGC
ACCGAGCGTG ACGACGTCAA CTTCCTCAAA CACACCCTCG CCTTCCGCGA TGCTGATGGC
ACGACTCGCC TGGAGTACAG CGACGTGAAG ATTACTACGC TGCCGCCAGC TAAACGCGTT
TACGGTGGCG AAGCGGATGC AGCCGATAAG GCGGAAGCAG CCAATAAGAA GGAGAAGGCG
AATGGCTGA
|
|---|
| Protein sequence | MQTFQADLAI VGAGGAGLRA AIAAAQANPN AKIALISKVY PMRSHTVAAE GGSAAVAQDH
DSFEYHFHDT VAGGDWLCEQ DVVDYFVHHC PTEMTQLELW GCPWSRRPDG SVNVRRFGGM
KIERTWFAAD KTGFHMLHTL FQTSLQFPQI QRFDEHFVLD ILVDDGHVRG LVAMNMMEGT
LVQIRANAVV MATGGAGRVY RYNTNGGIVT GDGMGMALSH GVPLRDMEFV QYHPTGLPGS
GILMTEGCRG EGGILVNKNG YRYLQDYGMG PETPLGEPKN KYMELGPRDK VSQAFWHEWR
KGNTISTPRG DVVYLDLRHL GEKKLHERLP FICELAKAYV GVDPVKEPIP VRPTAHYTMG
GIETDQNCET RIKGLFAVGE CSSVGLHGAN RLGSNSLAEL VVFGRLAGEQ AMERASTAGN
GNDAAINAQV AGVEQRLKDL VNQDGGENWA KIRDEMGMAM EEGCGIYRTP ELMQKTIDKL
AELQERFKRV RITDTSSVFN TDLLYTIELG HGLNVAECMA HSAMARKESR GAHQRLDEGC
TERDDVNFLK HTLAFRDADG TTRLEYSDVK ITTLPPAKRV YGGEADAADK AEAANKKEKA
NG
|
|---|
| |