Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4623 |
Symbol | frdC |
ID | 6145709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4724026 |
End bp | 4724421 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641619439 |
Product | fumarate reductase subunit C |
Protein accession | YP_001746550 |
Protein GI | 170679861 |
COG category | [C] Energy production and conversion |
COG ID | [COG3029] Fumarate reductase subunit C |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.129445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACTA AACGTAAACC GTATGTACGG CCAATGACGT CCACCTGGTG GAAAAAATTG CCGTTTTATC GCTTTTACAT GCTGCGCGAA GGCACGGCGG TTCCGGCTGT GTGGTTCAGC ATTGAACTGA TTTTCGGGCT GTTTGCCCTG AAAAATGGCC CGGAAGCCTG GGCGGGATTC GTCGACTTTT TACAAAACCC GGTTATCGTG ATCATTAACC TGATCACTCT GGCGGCAGCC CTGCTGCACA CCAAAACCTG GTTTGAGCTG GCACCAAAAG CAGCCAATAT CATTGTAAAA GACGAAAAAA TGGGACCAGA GCCAATTATC AAAAGTCTCT GGGCGGTAAC TGTGGTTGCC ACCATCGTAA TCCTGTTTGT TGCCCTGTAC TGGTAA
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Protein sequence | MTTKRKPYVR PMTSTWWKKL PFYRFYMLRE GTAVPAVWFS IELIFGLFAL KNGPEAWAGF VDFLQNPVIV IINLITLAAA LLHTKTWFEL APKAANIIVK DEKMGPEPII KSLWAVTVVA TIVILFVALY W
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