Gene EcSMS35_4619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4619 
Symbolblc 
ID6146756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4721839 
End bp4722372 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content54% 
IMG OID641619436 
Productouter membrane lipoprotein Blc 
Protein accessionYP_001746547 
Protein GI170683090 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.107417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGC TCCCTCTCGT TGCCGCAGCG ACAGCTGCAT TTCTGGTCGT TGCCTGCAGT 
TCTCCTACGC CGCCGCGTGG CGTGACCGTA GTGAATAATT TCGACGCTAA ACGCTATCTC
GGCACCTGGT ATGAGATTGC CCGTTTTGAT CACCGCTTTG AACGTGGACT GGAAAAAGTC
ACCGCAACAT ACAGCCTGCG GGATGACGGC GGCCTGAATG TCATTAATAA AGGCTATAAC
CCTGACAGAG GAATGTGGCA GCAGAGTGAA GGGAAAGCGT ACTTTACCGG CGCACCAACT
CGCGCTGCGC TGAAAGTGTC ATTCTTTGGT CCTTTCTATG GCGGTTATAA CGTTATTGCA
CTCGATCGGG AATACCGCCA TGCGCTGGTT TGCGGCCCGG ACCGCGACTA CCTGTGGATA
CTCTCTCGCA CGCCAACCAT TTCTGACGAA GTGAAACAGG AGATGCTGGC AGTCGCGACC
CGGGAAGGGT TTGATGTCAG TAAGTTTATT TGGGTACAGC AGCCCGGTAG TTAG
 
Protein sequence
MRLLPLVAAA TAAFLVVACS SPTPPRGVTV VNNFDAKRYL GTWYEIARFD HRFERGLEKV 
TATYSLRDDG GLNVINKGYN PDRGMWQQSE GKAYFTGAPT RAALKVSFFG PFYGGYNVIA
LDREYRHALV CGPDRDYLWI LSRTPTISDE VKQEMLAVAT REGFDVSKFI WVQQPGS