| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4610 |
|---|
| Symbol | |
|---|
| ID | 6146817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4714123 |
|---|
| End bp | 4715379 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641619426 |
|---|
| Product | inner membrane protein YjeH |
|---|
| Protein accession | YP_001746537 |
|---|
| Protein GI | 170683031 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.401918 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGAC TCAAACAAGA ACTGGGGCTG GCCCAGGGCA TTGGCCTGCT ATCGACGTCA
TTATTAGGCA CTGGCGTGTT TGCCGTTCCT GCGTTAGCTG CGCTGGTAGC GGGCAATAAC
AGCCTGTGGG CGTGGCCCGT TTTGATTATC TTAGTGTTCC CGATTGCGAT TGTGTTTGCG
ATTCTGGGTC GCCACTATCC CAGCGCAGGC GGTGTCGCGC ACTTCGTCGG TATGGCGTTT
GGTTCGCGGC TTGAGCGAGT CACCGGCTGG TTGTTTTTAT CGGTCATTCC CGTGGGTTTG
CCTGCCGCGC TACAAATTGC CGCCGGGTTC GGCCAGGCAA TGTTTGGCTG GCATAGCTGG
CAACTGTTGT TGGCAGAACT CGGTACGCTG GCGCTGGTGT GGTATATCGG TACTCGCGGT
GCCAGTTCCA GTGCTAATCT ACAAACAGTT ATTGCCGGAC TTATCGTCGC GCTGATTGTC
GCTATCTGGT GGGCGGGCGA TATCAAACCT GCGAATATCC CCTTCCCTGC ACCTGGTAAT
ATCGAACTTA CCGGGTTATT TGCTGCGTTA TCAGTGATGT TCTGGTGCTT TGTCGGTCTG
GAGGCATTTG CCCATCTTGC CTCGGAATTT AAAAATCCAG AGCGTGATTT TCCTCGTGCT
TTGATGATTG GTCTGCTGCT GGCAGGATTA GTCTACTGGG GCTGTACGGT AGTCGTCTTA
CACTTCGACG CCTATGGTGA ACAAATGGCC GCGGCAGCAT CGCTTCCAAA AATTGTAGTG
CAACTGTTCG GTGTAGGAGC GTTATGGATT GCCTGCGTGA TTGGCTATCT GGCCTGCTTT
GCCAGTCTCA ACATTTATAT ACAGAGCTTC GCCCGCCTGG TCTGGTCGCA GGCGCAACAT
AATCCTGACC ACTACCTGGC ACGCCTCTCT TCTCGTCATA TCCCGAATAA TGCCCTCAAT
GCGGTGCTCG GCTGCTGCGT GGTGAGCACG TTGGTGATTC ATGCTTTAGA GATCAATCTG
GACGCTCTTA TTATTTATGC CAATGGCATC TTTATTATGA TTTATCTGTT ATGCATGCTG
GCAGGTTGTA AATTATTGCA AGGACGTTAT CGACTACTGG CGGTGGTTGG CGGGCTGTTA
TGCGTTCTGT TACTGGCAAT GGTCGGCTGG AAAAGTCTCT ATGCGCTGAT CATGCTGGCG
GGGTTATGGC TGTTTCTGCC AAAACGAAAA ACGCCGGAAA ATGGCATAAC CACATAA
|
|---|
| Protein sequence | MSGLKQELGL AQGIGLLSTS LLGTGVFAVP ALAALVAGNN SLWAWPVLII LVFPIAIVFA
ILGRHYPSAG GVAHFVGMAF GSRLERVTGW LFLSVIPVGL PAALQIAAGF GQAMFGWHSW
QLLLAELGTL ALVWYIGTRG ASSSANLQTV IAGLIVALIV AIWWAGDIKP ANIPFPAPGN
IELTGLFAAL SVMFWCFVGL EAFAHLASEF KNPERDFPRA LMIGLLLAGL VYWGCTVVVL
HFDAYGEQMA AAASLPKIVV QLFGVGALWI ACVIGYLACF ASLNIYIQSF ARLVWSQAQH
NPDHYLARLS SRHIPNNALN AVLGCCVVST LVIHALEINL DALIIYANGI FIMIYLLCML
AGCKLLQGRY RLLAVVGGLL CVLLLAMVGW KSLYALIMLA GLWLFLPKRK TPENGITT
|
|---|
| |