| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4602 |
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| Symbol | cadC |
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| ID | 6145699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4705363 |
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| End bp | 4706901 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641619418 |
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| Product | DNA-binding transcriptional activator CadC |
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| Protein accession | YP_001746530 |
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| Protein GI | 170681004 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00143405 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.967142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAAC CTGTAGTTCG CGTTGGCGAA TGGCTTGTTA CTCCGTCCAT AAACCAAATT
AGCCGCAATG GGCGTCAACT TACCCTTGAG CCGAGATTAA TCGATCTTCT GGTTTTCTTT
GCTCAACACA GTGGCGAAGT ACTTAGCAGG GATGAACTTA TCGATAATGT CTGGAAGAGA
AGTATTGTCA CCAATCACGT TGTGACGCAG AGTATCTCAG AACTACGTAA GTCATTAAAA
GATAATGATG AAGATAGTCC TGTCTATATC GCTACTGTAC CAAAGCGCGG CTATAAATTA
ATGGTGCCGG TTATCTGGTA CAGCGAAGAA GAGGGAGAGG AAATAATGCT ATCTTCGCCT
CCCCCTATAC CAGAGGCGGT TCCTGCCACA GATTCTCCCT CCCACAGTCT TAACATTCAA
AACACCACAG CGCCACCTGA ACAATCCCCA GTTAAAAGCA AACGATTCAC TACCTTTTGG
GTATGGTTTT TTTTCCTGTT GTCGTTAGGT ATCTGTGTCG CACTGGTAGC GTTTTCAAGT
CTTGAAACAC GTCTTCCTAT GAGCAAATCG CGTATTTTGC TCAATCCACG CGATATTGAC
ATTAATATGG TTAATAAGAG TTGTAACAGC TGGAGTTCCC CGTATCAGCT CTCTTACGCG
ATAGGCGTGG GTGATTTGGT GGCGACATCA CTTAACACCT TCTCCACCTT TATGGTGCAT
GACAAAATCA ACTACAACAT TGATGAACCG AGCAGTTCCG GTAAAACATT ATCTATTGCG
TTTGTTAATC AGCGCCAATA CCGTGCTCAA CAATGCTTTA TGTCGGTAAA ATTGGTAGAC
AATGCAGATG GTTCAACCAT GCTGGATAAA CGTTATGTCA TCACTAACGG TAATCAGCTG
GCGATTCAAA ATGATTTACT CCAGAGTTTA TCAAAAGCGT TAAACCAACC GTGGCCACAA
CGAATGCAGG AGACGCTCCA GCAAATTTTG CCGCATCGTG GTGCGTTATT AACTAATTTT
TATCAGGCTC ATGATTATTT ACTGCATGGC GATGATAAAT CATTGAATCG TGCCAGTGAA
TTATTAGGTG AGATTGTTCA ATCATCCCCA GAATTTACCT ACGCGAGAGC AGAAAAAGCA
TTAGTTGATA TCGTGCGCCA TTCTCAACAT CCTTTAGATG AAAAACAATT AGCAGCACTG
AATACAGAAA TAGATAACAT TGTTACACTG CCGGAATTGA ATAACCTGTC CATTATATAT
CAAATAAAAG CGGTCAGTGC TCTGGTAAAA GGTAAAACAG ATGAGTCTTA CCAGGCGATA
AATACTGGCA TTGATCTTGA AATGTCCTGG CTAAATTATG TGTTGCTTGG CAAGGTTTAT
GAAATGAAGG GGATGAACCG GGAAGCAGCT GATGCATATC TCACCGCCTT TAATTTACGC
CCAGGGGCAA ACACCCTTTA CTGGATTGAA AATGGTATAT TCCAGACTTC TGTTCCTTAT
GTTGTACCTT ATCTCGACAA ATTTCTCGCT TCAGAATAA
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| Protein sequence | MQQPVVRVGE WLVTPSINQI SRNGRQLTLE PRLIDLLVFF AQHSGEVLSR DELIDNVWKR
SIVTNHVVTQ SISELRKSLK DNDEDSPVYI ATVPKRGYKL MVPVIWYSEE EGEEIMLSSP
PPIPEAVPAT DSPSHSLNIQ NTTAPPEQSP VKSKRFTTFW VWFFFLLSLG ICVALVAFSS
LETRLPMSKS RILLNPRDID INMVNKSCNS WSSPYQLSYA IGVGDLVATS LNTFSTFMVH
DKINYNIDEP SSSGKTLSIA FVNQRQYRAQ QCFMSVKLVD NADGSTMLDK RYVITNGNQL
AIQNDLLQSL SKALNQPWPQ RMQETLQQIL PHRGALLTNF YQAHDYLLHG DDKSLNRASE
LLGEIVQSSP EFTYARAEKA LVDIVRHSQH PLDEKQLAAL NTEIDNIVTL PELNNLSIIY
QIKAVSALVK GKTDESYQAI NTGIDLEMSW LNYVLLGKVY EMKGMNREAA DAYLTAFNLR
PGANTLYWIE NGIFQTSVPY VVPYLDKFLA SE
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