| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4591 |
|---|
| Symbol | dcuR |
|---|
| ID | 6145180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4694279 |
|---|
| End bp | 4694998 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641619407 |
|---|
| Product | DNA-binding transcriptional activator DcuR |
|---|
| Protein accession | YP_001746519 |
|---|
| Protein GI | 170682337 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4565] Response regulator of citrate/malate metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAATG TATTAATTAT CGATGACGAC GCAATGGTCG CGGAGCTGAA TCGCCGATAC
GTGGCACAAA TCCCGGGCTT TCAATGCTGT GGAACGGCTT CGACGCTGGA GAAAGCCAAA
GAGATTATTT TCAACAGCGA CACGCCTATC GACCTGATAT TGCTAGATAT CTATATGCAA
AAAGAGAACG GGCTCGATTT ACTGCCTGTC CTGCATAACG CGCGTTGCAA AAGTGATGTG
ATTGTCATCT CCTCCGCTGC CGATGCAGCA ACCATTAAAG ATTCGCTGCA TTACGGTGTT
GTGGATTACC TGATCAAACC CTTCCAGGCT TCCCGCTTTG AAGAGGCGCT CACCGGCTGG
CGGCAAAAGA AAATGGCGCT GGAAAAACAT CAGTATTATG ACCAGGCCGA GCTTGATCAG
CTAATCCACG GCAGCAGCTC CAACGAGCAG GATCCTCGTC GCTTGCCAAA AGGCTTAACG
CCGCAGACGT TACGCACGCT GTGCCAGTGG ATTGACGCGC ATCAGGACTA TGAGTTTTCA
ACCGACGAGC TGGCTAACGA GGTTAACATC TCGCGTGTTT CATGCCGTAA ATACCTCATC
TGGCTGGTCA ACTGCCACAT CTTGTTCACC AGTATCCATT ATGGCGTCAC GGGGCGTCCG
GTTTACCGTT ACCGTATTCA GGCAGAACAC TACTCACTGC TGAAACAATA TTGCCAATAA
|
|---|
| Protein sequence | MINVLIIDDD AMVAELNRRY VAQIPGFQCC GTASTLEKAK EIIFNSDTPI DLILLDIYMQ
KENGLDLLPV LHNARCKSDV IVISSAADAA TIKDSLHYGV VDYLIKPFQA SRFEEALTGW
RQKKMALEKH QYYDQAELDQ LIHGSSSNEQ DPRRLPKGLT PQTLRTLCQW IDAHQDYEFS
TDELANEVNI SRVSCRKYLI WLVNCHILFT SIHYGVTGRP VYRYRIQAEH YSLLKQYCQ
|
|---|
| |