| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4589 |
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| Symbol | dcuB |
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| ID | 6145910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4692368 |
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| End bp | 4693708 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641619405 |
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| Product | anaerobic C4-dicarboxylate transporter |
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| Protein accession | YP_001746517 |
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| Protein GI | 170682748 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases
[TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTTA CTATCCAACT TATCATAATA CTGATATGTC TGTTTTATGG TGCCAGAAAG
GGGGGTATCG CGCTGGGTTT ATTAGGCGGT ATCGGTCTGG TCATTCTGGT CTTCGTCTTC
CACCTTCAGC CAGGTAAACC ACCGGTTGAT GTCATGCTGG TTATCATTGC GGTGGTGGCA
GCATCGGCGA CCTTGCAAGC TTCGGGCGGT CTTGATGTCA TGCTGCAAAT TGCCGAGAAG
CTGCTGCGCC GCAACCCGAA ATATGTCTCA ATTGTCGCGC CGTTTGTGAC CTGTACGCTG
ACCATTCTTT GCGGTACGGG TCATGTGGTT TACACCATTC TGCCGATCAT CTACGACGTT
GCTATTAAGA ACAACATCCG TCCGGAACGT CCGATGGCGG CAAGTTCTAT CGGTGCACAG
ATGGGGATTA TCGCCAGTCC GGTGTCGGTT GCGGTCGTAT CTTTGGTTGC GATGCTGGGT
AATGTCACCT TTGATGGTCG CCATCTTGAG TTCCTCGACC TGCTGGCAAT CACCATTCCA
TCGACGTTAA TCGGTATCCT GGCGATCGGT ATCTTCAGTT GGTTCCGCGG TAAAGATCTG
GATAAAGACG AAGAGTTCCA GAAATTCATC TCCGTACCGG AAAACCGTGA GTATGTTTAC
GGTGATACCG CGACGCTGCT CGATAAAAAA CTGCCGAAAA GCAACTGGCT GGCAATGTGG
ATCTTCCTCG GGGCAATCGC TGTAGTCGCC CTTCTTGGTG CTGATTCGGA CCTGCGTCCA
TCCTTCGGCG GCAAACCGCT GTCGATGGTA CTGGTTATTC AGATGTTTAT GCTGCTGACC
GGGGCGCTGA TTATTATCCT GACCAAAACC AATCCCGCGT CTATCTCAAA AAACGAAGTC
TTCCGTTCCG GTATGATCGC CATCGTGGCG GTGTACGGTA TCGCATGGAT GGCTGAAACC
ATGTTCGGTG CGCATATGTC TGAAATTCAG GGCGTACTGG GTGAAATGGT GAAAGAGTAT
CCGTGGGCCT ATGCCATTGT TCTGCTGCTG GTTTCCAAGT TTGTAAACTC TCAGGCTGCG
GCGCTGGCGG CGATTGTTCC GGTCGCGCTG GCGATCGGCG TTGATCCGGC ATACATCGTG
GCTTCAGCAC CGGCTTGCTA CGGTTATTAC ATCCTGCCGA CTTATCCGAG CGATCTGGCA
GCGATTCAGT TTGACCGTTC CGGCACCACC CACATCGGTC GCTTCGTCAT CAACCACAGC
TTTATTCTGC CGGGGTTGAT TGGTGTGAGC GTATCGTGCG TCTTCGGCTG GATCTTCGCC
GCGATGTACG GGTTCTTATA A
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| Protein sequence | MLFTIQLIII LICLFYGARK GGIALGLLGG IGLVILVFVF HLQPGKPPVD VMLVIIAVVA
ASATLQASGG LDVMLQIAEK LLRRNPKYVS IVAPFVTCTL TILCGTGHVV YTILPIIYDV
AIKNNIRPER PMAASSIGAQ MGIIASPVSV AVVSLVAMLG NVTFDGRHLE FLDLLAITIP
STLIGILAIG IFSWFRGKDL DKDEEFQKFI SVPENREYVY GDTATLLDKK LPKSNWLAMW
IFLGAIAVVA LLGADSDLRP SFGGKPLSMV LVIQMFMLLT GALIIILTKT NPASISKNEV
FRSGMIAIVA VYGIAWMAET MFGAHMSEIQ GVLGEMVKEY PWAYAIVLLL VSKFVNSQAA
ALAAIVPVAL AIGVDPAYIV ASAPACYGYY ILPTYPSDLA AIQFDRSGTT HIGRFVINHS
FILPGLIGVS VSCVFGWIFA AMYGFL
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