| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4578 |
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| Symbol | basR |
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| ID | 6143186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4678234 |
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| End bp | 4678902 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641619394 |
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| Product | DNA-binding transcriptional regulator BasR |
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| Protein accession | YP_001746506 |
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| Protein GI | 170679832 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.800667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATTC TGATTGTTGA AGACGATACG CTGTTATTGC AGGGATTGAT TCTGGCGGCG
CAAACCGAAG GCTACGCGTG CGATGGCGTG ACAACCGCGC GGATGGCGGA ACAAAGCCTT
GAGGCCGGTC ATTACAGCCT GGTGGTACTG GATTTAGGGT TACCCGACGA AGATGGACTG
CATTTTCTCG CCCGTATCCG GCAGAAAAAA TACACCCTGC CGGTACTGAT CCTCACCGCT
CGCGATACGC TGACCGACAA AATCGCCGGG CTGGATGTCG GTGCCGATGA CTATCTGGTG
AAGCCTTTTG CGCTGGAAGA GTTACACGCC CGTATCCGCG CCCTGCTACG ACGCCATAAT
AATCAGGGCG AAAGTGAGCT GATTGTTGGC AATCTGACGC TGAATATGGG TCGCCGTCAG
GTATGGATGG GCGGTGAAGA GTTGATTCTG ACGCCCAAAG AATATGCTCT GCTGTCACGG
TTAATGCTCA AAGCAGGCAG TCCGGTGCAT CGGGAAATTC TCTACAACGA CATCTATAAC
TGGGACAATG AACCCTCGAC CAACACCCTG GAAGTGCATA TCCACAATCT GCGCGACAAA
GTGGGCAAAG CCCGTATCCG CACCGTGCGC GGATTTGGCT ATATGCTGGT CGCAAATGAG
GAAAACTAA
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| Protein sequence | MKILIVEDDT LLLQGLILAA QTEGYACDGV TTARMAEQSL EAGHYSLVVL DLGLPDEDGL
HFLARIRQKK YTLPVLILTA RDTLTDKIAG LDVGADDYLV KPFALEELHA RIRALLRRHN
NQGESELIVG NLTLNMGRRQ VWMGGEELIL TPKEYALLSR LMLKAGSPVH REILYNDIYN
WDNEPSTNTL EVHIHNLRDK VGKARIRTVR GFGYMLVANE EN
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