Gene EcSMS35_4576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4576 
SymbolproP 
ID6145370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4675454 
End bp4676956 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content50% 
IMG OID641619392 
Productproline/glycine betaine transporter 
Protein accessionYP_001746504 
Protein GI170680520 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00883] metabolite-proton symporter 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAA GGAAAAAAGT AAAACCGATT ACCCTTCGTG ATGTCACTAT TATTGATGAC 
GGTAAACTGC GTAAAGCCAT TACCGCAGCA TCACTGGGTA ATGCAATGGA ATGGTTCGAT
TTTGGTGTTT ATGGTTTTGT TGCTTACGCA TTAGGTAAAG TTTTTTTCCC GGGGGCTGAC
CCCAGCGTGC AGATGGTTGC TGCACTTGCC ACTTTCTCCG TTCCCTTTCT GATTCGACCG
CTTGGCGGGC TCTTCTTTGG TATGTTGGGC GATAAATATG GTCGCCAGAA GATCCTCGCT
ATCACTATTG TGATTATGTC GATCAGTACG TTCTGTATTG GCTTAATACC GTCCTACGAC
ACGATTGGTA TTTGGGCACC GATTCTGCTG TTGATCTGTA AGATGGCACA AGGTTTCTCG
GTCGGCGGTG AATATACCGG GGCGTCGATA TTTGTTGCGG AATACTCCCC TGACCGTAAA
CGTGGATTTA TGGGCAGCTG GCTGGACTTC GGTTCTATTG CCGGGTTTGT GCTGGGTGCT
GGCGTGGTGG TGTTAATTTC GACCATTGTC GGCGAAGAGA ACTTCCTCGA CTGGGGCTGG
CGTATTCCGT TCTTTATCGC TCTGCCGTTA GGGATTATCG GGCTTTACCT GCGCCATGCG
CTGGAAGAGA CTCCGGCGTT CCAGCAGCAT GTTGATAAAC TGGAACAGGG CGACCGCGAA
GGTTTGCAGG ATGGCCCGAA AGTCTCGTTT AAAGAGATTG CCACTAAATA CTGGCGCAGC
CTGTTGACAT GTATTGGTCT GGTAATTGCC ACCAACGTGA CTTACTACAT GTTGCTGACC
TATATGCCGA GTTATTTGTC GCATAACCTG CATTACTCCG AAGACCACGG GGTGCTGATT
ATTATCGCCA TTATGATCGG TATGCTGTTT GTCCAGCCGG TGATGGGCTT GCTGAGTGAC
CGTTTTGGCC GTCGTCCGTT TGTGCTACTT GGTAGTGTTG CACTGTTTGT GTTGGCGATC
CCGGCGTTTA TTCTGATTAA CAGTAACGTC ATCGGCCTGA TTTTTGCCGG GTTACTGATG
CTGGCGGTGA TCCTTAACTG CTTTACGGGC GTTATGGCTT CTACCTTGCC AGCGATGTTC
CCGACGCATA TCCGTTACAG CGCGCTGGCG GCGGCATTTA ATATTTCGGT GCTGGTTGCC
GGTCTGACGC CAACACTGGC GGCCTGGCTG GTCGAAAGCT CGCAGAATCT GATGATGCCT
GCCTATTACC TGATGGTAGT GGCGGTGGTT GGTTTAATCA CCGGCGTAAC CATGAAAGAG
ACGGCAAATC GTCCGTTGAA AGGTGCGACA CCGGCGGCGT CAGATATACA GGAAGCGAAG
GAAATTCTCG TCGAGCATTA CGATAATATC GAGCAGAAAA TCGATGATAT TGACCACGAG
ATTGCCGATT TGCAGGCGAA ACGTACCCGC CTGGTGCAGC AACATCCGCG AATTGATGAA
TAA
 
Protein sequence
MLKRKKVKPI TLRDVTIIDD GKLRKAITAA SLGNAMEWFD FGVYGFVAYA LGKVFFPGAD 
PSVQMVAALA TFSVPFLIRP LGGLFFGMLG DKYGRQKILA ITIVIMSIST FCIGLIPSYD
TIGIWAPILL LICKMAQGFS VGGEYTGASI FVAEYSPDRK RGFMGSWLDF GSIAGFVLGA
GVVVLISTIV GEENFLDWGW RIPFFIALPL GIIGLYLRHA LEETPAFQQH VDKLEQGDRE
GLQDGPKVSF KEIATKYWRS LLTCIGLVIA TNVTYYMLLT YMPSYLSHNL HYSEDHGVLI
IIAIMIGMLF VQPVMGLLSD RFGRRPFVLL GSVALFVLAI PAFILINSNV IGLIFAGLLM
LAVILNCFTG VMASTLPAMF PTHIRYSALA AAFNISVLVA GLTPTLAAWL VESSQNLMMP
AYYLMVVAVV GLITGVTMKE TANRPLKGAT PAASDIQEAK EILVEHYDNI EQKIDDIDHE
IADLQAKRTR LVQQHPRIDE