| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4574 |
|---|
| Symbol | |
|---|
| ID | 6146999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4672087 |
|---|
| End bp | 4674315 |
|---|
| Gene Length | 2229 bp |
|---|
| Protein Length | 742 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641619390 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001746502 |
|---|
| Protein GI | 170683254 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACACAC AGACCCTGTA TGAGTTAAGT CAGGAGGCTG AACGCCTGTT ACAGCTTTCT
CGCCAACAGT TGCAGTTACT GGAAAAAATG CCTCTCTCTG TACCCGGAGA CGATGCGCCA
CAACTGGCTT TACCCTGGAG TCAGCCTAAT ATCGCCGAAC GTCACGCGAT GCTGAATAAT
GAGTTGCGTA AAATTTCCCG ACTGGAAATG GTGCTGGCGA TTGTCGGTAC CATGAAAGCA
GGGAAATCAA CCACCATTAA TGCCATTGTT GGTACGGAGG TTCTGCCTAA TCGCAATCGC
CCAATGACTG CGCTGCCGAC GCTTATTCGC CATACGCCCG GGCAAAAAGA ACCGGTACTG
CATTTTTCAC ATGTCGCGCC AATCGATTGT TTAATTCAAA AATTACAACA GCGCCTGCGT
GATTGCGATA TTAAGCATCT GACCGATGTG CTGGAAATAG ATAAAGATAT GCGTGCGCTT
ATGCAGCGGA TCGAAAATGG CGTCGCTTTC GAAAAATATT ATCTGGGTGC CCAGCCTATT
TTTCATTGTC TGAAAAGTTT GAATGATTTG GTGCGACTGG CGAAGGCGCT GGACGTCGAT
TTTCCTTTTT CTGCTTACGC CGCCATTGAG CATATTCCCG TGATTGAAGT GGAGTTTGTC
CATCTGGCGG GGCTGGAGAG TTATCCCGGC CAATTGACGT TACTGGATAC CCCCGGGCCA
AATGAAGCCG GGCAACCGCA TCTGCAAAAA ATGCTTAACC AGCAGCTGGC ACGCGCCTCG
GCGGTACTGG CGGTGCTGGA TTATACGCAA CTGAAATCGA TCTCCGATGA AGAGGTCCGT
GAGGCGATTT TGGCGGTGGG GCAATCGGTG CCGTTGTATG TGCTGGTCAA TAAGTTCGAT
CAACAGGATC GTAACAGTGA CGACGCCGAC CAGGTGCGGG CACTGATTTC CGGGACGCTG
ATGAAAGGCT GTATTACGCC ACAGCAGATA TTTCCAGTGT CGTCGATGTG GGGCTACCTG
GCGAATCGGG CGCGTAATGA GTTAGCCAAC AGCGGTAAGT TACCCGCGCC AGAGCAACAA
CGCTGGGTGG AAGATTTTGC CCATGCCGCG CTCGGCAGGC GCTGGCGTCA TGCCGACCTG
GCGAACCTCG AACATATTCG TCATGCTGCC GATCAGTTGT GGGAAGATTC GCTGTTCGCC
AAGCCAATTC AGGCGTTGCT TCATGCCGCT TACGCTAACG CCTCGTTGTA TGCTCTGCGA
TCTGCCGCGC ATAAACTGTT GAATTACGCG CAGCAGGCGC GGGAATACCT GGATTTTCGT
GCGCACGGGT TAAACGTCGC TTGTGAACAA TTGCGGCAAA ATATCCACCA GATCGAAGAA
AGTTTGCAGC TATTTCAACT CAATCAGGCT CAGGTGAGCG GCGAGATTAA ACATGAAATC
GAGCTGGCCC TGACCTCCGC CAACCTCTTT CTGCGTCAAC AGCAAGATGC GGTGAATGCC
CAGTTAGCCG CGTTGTTTCA GGATGATTCG GGGTCATTAA GCGAGATTCG TACCTGCTGT
GAGACACTGT TACAGACGGC GCAGAACACC ATCAGTCGCG ACTTTACGCT GCGTTTTGCC
GAGCTTGAAT CCACCCTTTG CCGGGTGTTA ACCGATGTTA TTCGGCCCAT TGAGCAACAA
GTCAAAATGG AATTGAGCGA GTCAGGGTTT CGTCCTGGGT TTCATTTTCC TGTTTTTCAC
AGCGCAGTTC CCCACTTCAA CACTCGCCAG CTGTTCAGTG AAGTCATTTC GCGCCAGGAC
GCAATGGACG AGCAGAGCAC GCGTTTAGGC GTTGTGCGTG AGACTTTTTC GCGCTGGTTG
AATCAGCCCG ACTGGGGACG GGGAAATGAG AAATCCCCGA CAGAGACGGT TGATTACAGT
GTGTTGCAAC GAGCATTAAG CGCAGAAGTC GATCTTTATT GCCAACAAAT GGCTAAAGTT
CTGGCAGAGC AGGTCGATGA ATCTGTTACG GCAGGCATGA ATACTTTTTT CGCTGAGTTC
GCTTCATGTT TGACGGAATT ACAGACGCGT TTACGCGAAA GCCTGGCTCT GCGTCAACAA
AATGAATCGG TGGTCAGGCT GATGCAGCAG CAATTGCAGC AGGCTGTGAT GACTCACAGC
TGGATTTACA CCGACGCTCA GCTGTTACGC GATGATATTC AAACACTTTT CACGGCAGAA
CGATATTGA
|
|---|
| Protein sequence | MYTQTLYELS QEAERLLQLS RQQLQLLEKM PLSVPGDDAP QLALPWSQPN IAERHAMLNN
ELRKISRLEM VLAIVGTMKA GKSTTINAIV GTEVLPNRNR PMTALPTLIR HTPGQKEPVL
HFSHVAPIDC LIQKLQQRLR DCDIKHLTDV LEIDKDMRAL MQRIENGVAF EKYYLGAQPI
FHCLKSLNDL VRLAKALDVD FPFSAYAAIE HIPVIEVEFV HLAGLESYPG QLTLLDTPGP
NEAGQPHLQK MLNQQLARAS AVLAVLDYTQ LKSISDEEVR EAILAVGQSV PLYVLVNKFD
QQDRNSDDAD QVRALISGTL MKGCITPQQI FPVSSMWGYL ANRARNELAN SGKLPAPEQQ
RWVEDFAHAA LGRRWRHADL ANLEHIRHAA DQLWEDSLFA KPIQALLHAA YANASLYALR
SAAHKLLNYA QQAREYLDFR AHGLNVACEQ LRQNIHQIEE SLQLFQLNQA QVSGEIKHEI
ELALTSANLF LRQQQDAVNA QLAALFQDDS GSLSEIRTCC ETLLQTAQNT ISRDFTLRFA
ELESTLCRVL TDVIRPIEQQ VKMELSESGF RPGFHFPVFH SAVPHFNTRQ LFSEVISRQD
AMDEQSTRLG VVRETFSRWL NQPDWGRGNE KSPTETVDYS VLQRALSAEV DLYCQQMAKV
LAEQVDESVT AGMNTFFAEF ASCLTELQTR LRESLALRQQ NESVVRLMQQ QLQQAVMTHS
WIYTDAQLLR DDIQTLFTAE RY
|
|---|
| |