| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4552 |
|---|
| Symbol | alsC |
|---|
| ID | 6143888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4654097 |
|---|
| End bp | 4655077 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641619368 |
|---|
| Product | D-allose transporter subunit |
|---|
| Protein accession | YP_001746480 |
|---|
| Protein GI | 170684183 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTTTA CCACAAGAGT AAAAAGCGAA GCGAGCGAGA AGAAACCGTT CAACTTTGCG
CTGTTCTGGG ATAAATACGG CACCTTTTTT ATCCTGGCGA TCATCGTCGC CATCTTTGGT
TCGCTGTCAC CAGAATATTT TCTGACCACC AATAATATTA CCCAGATTTT TGTGCAAAGC
TCCGTGACGG TATTGATCGG CATGGGCGAG TTTTTCGCTA TCCTGGTCGC TGGTATCGAC
CTCTCGGTTG GCGCGATTCT GGCGCTTTCC GGTATGGTGA CCGCCAAACT GATGTTGGCA
GGTGTTGACC CGTTTCTCGC GGCGCTGATT GGCGGTGTAC TGGTTGGCGG CGCACTGGGG
GCGATCAACG GCTGCCTGGT CAACTGGACG GGGCTACACC CATTTATTAT CACCCTTGGT
ACCAACGCCA TTTTCCGTGG GATCACGCTG GTGATCTCCG ATGCCAACTC GGTATACGGC
TTCTCATTTG ACTTCGTGAA CTTCTTTGCC GCCAGCGTAA TTGGGATACC TGTTCCCGTT
ATCTTCTCGC TAATTGTCGC GCTCATCCTT TGGTTTCTGA CAACGCGTAT GCGGCTCGGA
CGCAACATCT ACGCACTGGG CGGCAACAAA AACTCGGCGT TCTATTCCGG GATTGACGTG
AAATTCCACA TCCTGGTGGT GTTTATCATC TCCGGTGTTT GTGCAGGTCT GGCAGGCGTC
GTCTCAACTG CACGACTCGG TGCCGCAGAA CCGCTTGCCG GTATGGGTTT TGAAACCTAT
GCCATTGCCA GCGCCATCAT TGGCGGCACC AGTTTCTTCG GCGGCAAGGG GCGCATTTTC
TCTGTGGTGA TTGGCGGGTT GATCATCGGC ACCATCAACA ACGGTCTGAA TATTTTGCAG
GTACAAACCT ATTACCAACT GGTGGTGATG GGCGGATTAA TTATCGCGGC TGTCGCCCTT
GACCGTCTTA TCAGTAAGTA A
|
|---|
| Protein sequence | MGFTTRVKSE ASEKKPFNFA LFWDKYGTFF ILAIIVAIFG SLSPEYFLTT NNITQIFVQS
SVTVLIGMGE FFAILVAGID LSVGAILALS GMVTAKLMLA GVDPFLAALI GGVLVGGALG
AINGCLVNWT GLHPFIITLG TNAIFRGITL VISDANSVYG FSFDFVNFFA ASVIGIPVPV
IFSLIVALIL WFLTTRMRLG RNIYALGGNK NSAFYSGIDV KFHILVVFII SGVCAGLAGV
VSTARLGAAE PLAGMGFETY AIASAIIGGT SFFGGKGRIF SVVIGGLIIG TINNGLNILQ
VQTYYQLVVM GGLIIAAVAL DRLISK
|
|---|
| |