| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4545 |
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| Symbol | mdtO |
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| ID | 6145846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4646635 |
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| End bp | 4648686 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641619361 |
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| Product | multidrug efflux system protein MdtO |
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| Protein accession | YP_001746473 |
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| Protein GI | 170681173 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC TCAACTCCCT GCCATTACCG GTGGTCAGGC TGCTGGCGTT CTTTCATGAA
GAGTTAAGCG AGCGGCGGCC AGGTCGTGTG CCGCAGACCG TGCAACTCTG GGTAGGCTGC
CTGCTGGTGA TTCTGATCTC GATGACCTTC GAGATCCCCT TTGTGGCGTT ATCGCTGGCG
GTGCTGTTTT ACGGTATTCA GTCCAACGCG TTTTACACCA AATTTGTCGC GATCTTGTTT
GTGGTTGCCA CGGTGCTGGA GATCGGCAGC CTGTTTTTGA TCTACAAATG GTCATACGGC
GAACCGTTGA TCCGATTGAT CATCGCAGGG CCGATCCTGA TGGGATGTAT GTTTTTGATG
CGCACCCATC GGCTGGGACT GGTCTTTTTC GCTGTCGCCA TTGTCGCCAT TTACGGGCAA
ACCTTCCCCG CCATGCTCGA CTATCCGGAA GTGGTCGTGC GCTTAACGCT GTGGTGTATC
GTTGTTGGCC TCTATCCAAC CTTGCTGATG ACGTTAATCG GCGTGCTGTG GTTTCCCAGC
CGCGCTATCA CGCAGATGCA TCAGGCGCTT AATGATCGGC TTGATGATGC CATTAGCCAC
CTGACGAACA GCCTCACACC GCTACCCGAA ACGCGGATTG AAAGAGAGGC GCTGGCGCTG
CAAAAACTCA ATGTCTTTTG CCTCGCGGAC GATGCCGACT GGCGTACTCA GAGCGCATGG
TGGCAAAGCT GTGTGGCAAC GGTAACCTAC ATTTACTCGA CGCTGAATCG CTACGATCCC
ACCTCTTTTG CTGATTCTCA GGCAATTATT GAATTCCGGC AAAAATTAGC CTCAGAAATC
AACAAGCTGC AGCATGCCAT TGCCGAAGGT CAGTGCTGGC AAAGCGACTG GCGGATCACT
GAAAGTCAAG CGATGGCGGC ACGGGAATGT AACCTGGAGA ATATCTGCCA GACATTGTTG
CAACTGGGTC AGATGGACCC GAATACGCCG CCAACGCCCG CCACCAAACC GCCATCAATG
GTCGCCGACG CTTTTACCAA TCCAGACTAT ATGCGCTACG CGGTAAAAAC GCTGCTCGCC
TGTTTGATCT GTTACACCTT CTACAGCGGC GTGGACTGGG AAGGCATTCA CACCTGTATG
CTGACCTGCG TGATCGTCGC TAATCCAAAT GTCGGTTCGT CGTACCAGAA GATGGTGCTG
CGTTTTGGCG GGGCCTTTTG CGGTGCGATT CTGGCGCTGT TATTCACGCT ACTGGTCATG
CCCTGGCTGG ACAATATTGT CGAATTGCTG TTTGTGCTGG CACCGATTTT CCTGTTGGGC
GCATGGATTG CCACCAGCTC TGAACGCTCT TCTTATATCG GCACACAGAT GGTGGTCACC
TTCGCGCTCG CCACGCTCGA AAATGTTTTT GGCCCGGTGT ACGACCTGGT GGAAATTCGC
GATCGCGCCC TGGGTATCAT CATTGGTACC GTGGTGTCCG CGGTGATTTA CACCTTTGTC
TGGCCTGAAA GTGAAGCGCG CACCCTGCCG CAAAAACTGG CTGGCGCGCT GGGTATGTTA
AGTAAAGTAA TGCGGATCCC ACGCCAGCAG GAAGTCACGG CTCTGCGCAC TTATCTGCAA
ATTCGCATAG GTCTGCATGC GGCGTTTAAT GCCTGTGAAG AGATGTGCCA ACGCGTGGCG
CTGGAGCGTC AACTGGACAG CGAAGAACGC GCCTTACTGA TTGAACGTTC GCAAACGGTT
ATTCGTCAGG GTCGCGATAT TCTTCACGCC TGGGATGCAA CCTGGAACTC GGCGCAGGCG
CTGGATAACG CACTACAGCC GGACAGAGCT GGTCAGTTTG CCGACGCCCT GGAGAAATAC
GCTGCCGGTC TGGCAACCGC ACTCAGTCGT TCTCCTCAAA TAACGCTTGA AGAAACACCC
GCCTCGCAGG CCATCCTGCC GACCTTATTA AAACAGGAGC AACACGTCTG CCAGCTTTTC
GCCCGCTTGC CAGACTGGAC AGCCCCGGCA TTAACGCCCG CCACGGAACA GGCACAAGGA
GCCACGCAAT GA
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| Protein sequence | MSALNSLPLP VVRLLAFFHE ELSERRPGRV PQTVQLWVGC LLVILISMTF EIPFVALSLA
VLFYGIQSNA FYTKFVAILF VVATVLEIGS LFLIYKWSYG EPLIRLIIAG PILMGCMFLM
RTHRLGLVFF AVAIVAIYGQ TFPAMLDYPE VVVRLTLWCI VVGLYPTLLM TLIGVLWFPS
RAITQMHQAL NDRLDDAISH LTNSLTPLPE TRIEREALAL QKLNVFCLAD DADWRTQSAW
WQSCVATVTY IYSTLNRYDP TSFADSQAII EFRQKLASEI NKLQHAIAEG QCWQSDWRIT
ESQAMAAREC NLENICQTLL QLGQMDPNTP PTPATKPPSM VADAFTNPDY MRYAVKTLLA
CLICYTFYSG VDWEGIHTCM LTCVIVANPN VGSSYQKMVL RFGGAFCGAI LALLFTLLVM
PWLDNIVELL FVLAPIFLLG AWIATSSERS SYIGTQMVVT FALATLENVF GPVYDLVEIR
DRALGIIIGT VVSAVIYTFV WPESEARTLP QKLAGALGML SKVMRIPRQQ EVTALRTYLQ
IRIGLHAAFN ACEEMCQRVA LERQLDSEER ALLIERSQTV IRQGRDILHA WDATWNSAQA
LDNALQPDRA GQFADALEKY AAGLATALSR SPQITLEETP ASQAILPTLL KQEQHVCQLF
ARLPDWTAPA LTPATEQAQG ATQ
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