| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4536 |
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| Symbol | nrfE |
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| ID | 6146496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4637546 |
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| End bp | 4639228 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641619352 |
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| Product | heme lyase subunit NrfE |
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| Protein accession | YP_001746464 |
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| Protein GI | 170682982 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTGTTAA GTCTCGGGGT CAACGTGTTG ACCCCGTTGA CGGCCTTTGC GGGAGTGCGG
TTGCGCTGGC CTGCCATGAT GCGACTCACT TGCATCGGCA TTCTGGCGCA GTTCGCGCTC
CTGCTGCTCG CCTTTGGCGT ACTGACGTAT TGTTTTCTCA TCAGCGATTT CTCGGTCATT
TATGTCGCCC AACATAGCTA CAGCCTGCTG TCGTGGGAAC TCAAACTGGC GGCGGTGTGG
GGCGGTCATG AAGGTTCGCT GCTGCTTTGG GTGCTGCTGC TTTCCGCCTG GAGCGCGCTG
TTTGCCTGGC ATTATCGGCA GCAAACCGAT CCGCTATTTC CGCTGACGCT AGCCGTTTTA
TCTCTCATGC TCGCCGCACT GCTACTGTTT GTAGTGCTGT GGTCCGATCC CTTCGTGCGG
ATATTTCCGC CAGCAATCGA AGGCCGCGAT CTCAATCCGA TGCTGCAACA TCCCGGTCTT
ATCTTTCATC CACCGCTGCT TTATCTCGGC TACGGCGGTT TGATGGTGGC GGCGAGCGTG
GCGCTGGCGA GTTTACTGCG CGGCGAGTTT GATGGTACCT GCGCCCGAAT TTGCTGGCGC
TGGGCACTAC CAGGCTGGGG GGCATTAACG GCGGGGATCA TCCTCGGTTC CTGGTGGGCC
TATTGCGAAC TGGGCTGGGG CGGCTGGTGG TTCTGGGATC CGGTGGAAAA CGCCTCTTTA
TTACCCTGGC TTTCTGCCAC TGCGCTGCTG CACAGTTTGT CCCTGACACG CCAGCGGGGG
ATTTTCCGCC ACTGGTCGCT GTTACTGGCG ATAGTTACTC TGATGCTGTC GCTGCTGGGC
ACCTTAATTG TCCGTTCTGG CATTCTGGTT TCGGTTCATG CGTTCGCGCT GGATAACGTT
CGCGCCGTGC CGTTGTTCAG CCTGTTTGCA CTGATTAGCC TTGCGTCTCT GACTCTGTAT
GGCTGGCGAG CGCGGGACGG TGGCCCGGCG GTGCGTTTTT CGGGGTTATC GCGGGAAATG
TTAATCCTCG CTACGCTGTT GCTGTTTTGC GCAGTGCTAC TGATCGTGCT GGTGGGAACG
CTTTATCCGA TGATTTACGG CCTGCTGGGC TGGGGACGCC TCTCCGTTGG CGCGCCGTAT
TTTAACCGTG CGACGTTACC GTTTGGTCTG TTGATGCTGG TGGTGATTGT GCTGGCGACG
TTTGTCTCTG GCAAACGCGT GCAGCTTCCG GCGCTGCTGG CGCATGCGGG CGTGCTGTTA
TTTGCCGCAG GGATCGTGGT CTCCAGCGTC AGCCGTCAGG AGATCAGCCT GAATTTACAG
CCGGGTCAGC AGGTGACGCT GGCAGGATAC GCCTTCCGTT TTGAGCGTCT CGATCTGCAA
GCCAGAGGCA ATTACACCAG CGAAAAAGCG ATAGTGGCAC TGTTTGACCA TCAGCAACGT
ATTGGTGAAC TGACGCCGGA GCGGCGTTTT TATGAAGCAC GCCGTCAGCA AATGATGGAA
CCGTCAATTC GCTGGAACGG CATCCATGAC TGGTATGCGG TCATGGGGGA GAAAACTGGG
CCGGATCGTT ACGCTTTTCG TTTGTATGTA CAAAGCGGTG TGCGCTGGAT CTGGGGGGGA
GGATTGTTGA TGATTGCGGG CGCATTGTTA AGCGGATGGC GGGGGAGGAA GCGCGATGAA
TAA
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| Protein sequence | MLLSLGVNVL TPLTAFAGVR LRWPAMMRLT CIGILAQFAL LLLAFGVLTY CFLISDFSVI
YVAQHSYSLL SWELKLAAVW GGHEGSLLLW VLLLSAWSAL FAWHYRQQTD PLFPLTLAVL
SLMLAALLLF VVLWSDPFVR IFPPAIEGRD LNPMLQHPGL IFHPPLLYLG YGGLMVAASV
ALASLLRGEF DGTCARICWR WALPGWGALT AGIILGSWWA YCELGWGGWW FWDPVENASL
LPWLSATALL HSLSLTRQRG IFRHWSLLLA IVTLMLSLLG TLIVRSGILV SVHAFALDNV
RAVPLFSLFA LISLASLTLY GWRARDGGPA VRFSGLSREM LILATLLLFC AVLLIVLVGT
LYPMIYGLLG WGRLSVGAPY FNRATLPFGL LMLVVIVLAT FVSGKRVQLP ALLAHAGVLL
FAAGIVVSSV SRQEISLNLQ PGQQVTLAGY AFRFERLDLQ ARGNYTSEKA IVALFDHQQR
IGELTPERRF YEARRQQMME PSIRWNGIHD WYAVMGEKTG PDRYAFRLYV QSGVRWIWGG
GLLMIAGALL SGWRGRKRDE
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