Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4528 |
Symbol | |
ID | 6145685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4627566 |
End bp | 4629215 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641619344 |
Product | Na+/H+ antiporter |
Protein accession | YP_001746456 |
Protein GI | 170682054 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAATCT TCTTCACCAT ACTGATAATG ACCCTCGTGG TCTCGCTGTC CGGGGTGGTC ACTCGTGTCA TGCCCTTTCA GATCCCGCTT CCGCTTATGC AAATCGCCAT CGGTGCGCTA CTGGCGTGGC CGACGTTTGG TTTGCATGTG GAGTTTGATC CTGAACTCTT TTTAGTCTTG TTTATCCCGC CGTTGCTGTT CGCTGATGGC TGGAAAACGC CGACCCGTGA ATTTCTCGAA CATGGGCGAG AGATTTTCGG CCTCGCGCTG GCGCTGGTGG TGGTCACCGT GGTCGGCATT GGCTTCCTTA TTTACTGGGT GGTGCCGGGC ATTCCGCTGA TCCCCGCCTT TGCGCTGGCG GCGGTGCTTT CTCCGACCGA TGCTGTGGCG CTCTCCGGGA TTGTTGGCGA AGGGCGCATC CCGAAAAAAA TCATGGGCAT TTTGCAGGGC GAAGCGTTGA TGAATGACGC CTCCGGTCTG GTGTCGTTGA AGTTTGCCGT GGCAGTGGCG ATGGGGACGA TGATCTTCAC CGTCGGTGGT GCGACGGTCG AATTTATGAA AGTGGCCATT GGCGGTATTC TCGCCGGTTT TGTGGTGAGC TGGCTGTACG GTCGCTCGCT GCGATTCCTC AGCCGCTGGG GCGGTGATGA ACCCGCGACG CAGATTGTTC TACTGTTCTT GCTGCCATTC GCTTCTTATC TGATTGCCGA ACATATTGGC GTTTCCGGCA TCCTCGCTGC GGTTGCCGCC GGGATGACCA TCACCCGCTC CGGTGTGATG CGCCGTGCGC CGCTGGCAAT GCGCCTGCGC GCAAACAGTA CCTGGGCGAT GCTGGAATTT GTCTTTAACG GCATGGTATT CCTGCTGTTA GGTCTGCAGC TGCCGGGTAT TCTGGAGACG TCGCTGATGG CGGCAGAAAT CGACCCTAAC GTCGAAATCT GGATGCTGTT TACCGATATC ATTCTGATTT ATGCGGCGCT GATGCTGGTC CGTTTCGGCT GGCTGTGGAC GATGAAAAAG TTCAGCAACC GCTTCCTGAA GAAGAAGCCG ATGGAGTTTG GTTCGTGGAC TACACGAGAA ATCCTGATCG CGTCTTTCGC CGGGGTGCGT GGGGCGATCA CTCTGGCCGG TGTGCTCTCT ATCCCGCTGC TCTTGCCGGA TGGTAACGTC TTCCCGGCGC GCTATGAGCT GGTGTTCCTG GCGGCTGGTG TCATTCTCTT CTCGCTGTTT GTCGGCGTGG TGATGTTGCC TATTCTGCTA CAACACATTG AAGTCGCGGA CCATTCGCAA CAATTGAAAG AGGAACGTAT TGCGCGAGCG GCAACGGCAG AAGTGGCGAT TGTGGCGATC CAGAAAATGG AGGAGCGTCT GGCGGCGGAT ACCGAAGAGA ATATCGATAA CCAGCTGCTC ACAGAGGTTA GTTCTCGCGT CATTGGTAAC CTGCGTCGTC GCGCCGATGG ACGTAATGAT GTAGAAAGTT CAATCCTGGA AGAGAACCTG GAGCGTCGCT TCCGTCTGGC GGCATTGCGT TCTGAACGTG CTGAACTGTA CCACCTGCGC GCCACGCGGG AGATCAGTAA CGAAACGCTG CAAAAATTAT TGCACGATCT CGATTTGCTT GAAGCGTTGC TGATTGAAGA GAACCAATAA
|
Protein sequence | MEIFFTILIM TLVVSLSGVV TRVMPFQIPL PLMQIAIGAL LAWPTFGLHV EFDPELFLVL FIPPLLFADG WKTPTREFLE HGREIFGLAL ALVVVTVVGI GFLIYWVVPG IPLIPAFALA AVLSPTDAVA LSGIVGEGRI PKKIMGILQG EALMNDASGL VSLKFAVAVA MGTMIFTVGG ATVEFMKVAI GGILAGFVVS WLYGRSLRFL SRWGGDEPAT QIVLLFLLPF ASYLIAEHIG VSGILAAVAA GMTITRSGVM RRAPLAMRLR ANSTWAMLEF VFNGMVFLLL GLQLPGILET SLMAAEIDPN VEIWMLFTDI ILIYAALMLV RFGWLWTMKK FSNRFLKKKP MEFGSWTTRE ILIASFAGVR GAITLAGVLS IPLLLPDGNV FPARYELVFL AAGVILFSLF VGVVMLPILL QHIEVADHSQ QLKEERIARA ATAEVAIVAI QKMEERLAAD TEENIDNQLL TEVSSRVIGN LRRRADGRND VESSILEENL ERRFRLAALR SERAELYHLR ATREISNETL QKLLHDLDLL EALLIEENQ
|
| |