Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4513 |
Symbol | dnaB |
ID | 6145859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4611881 |
End bp | 4613296 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641619329 |
Product | replicative DNA helicase |
Protein accession | YP_001746441 |
Protein GI | 170683120 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0305] Replicative DNA helicase |
TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGGAA ATAAACCCTT CAACAAACAG CAGGCTGAAC CCCGCGAACG CGATCCACAA GTTGCCGGGC TGAAAGTGCC TCCGCACTCG ATCGAAGCGG AGCAGTCGGT GTTGGGCGGT TTAATGCTGG ATAACGAACG CTGGGATGAT GTAGCCGAGC GTGTGGTGGC AGACGACTTT TACACCCGCC CACACCGTCA TATCTTTACT GAAATGGCGC GTTTGCAGGA AAGCGGTAGT CCTATCGATC TGATTACCCT TGCGGAATCG CTGGAACGCC AGGGGCAACT TGATAGCGTC GGTGGTTTCG CTTATCTGGC GGAGCTGTCA AAAAATACGC CAAGTGCGGC GAACATCAGT GCTTATGCTG ACATCGTGCG TGAACGTGCC GTTGTTCGCG AGATGATTTC GGTTGCGAAT GAGATTGCCG AAGCCGGTTT TGATCCGCAG GGGCGTACCA GCGAAGATCT GCTGGACCTG GCTGAATCCC GCGTCTTTAA AATTGCCGAA AGTCGTGCAA ACAAAGACGA AGGGCCGAAG AACATCGCCG ATGTGCTCGA CGCCACGGTG GCGCGTATTG AGCAGTTGTT TCAGCAGCCA CACGATGGCG TTACCGGGGT AAACACCGGT TATGACGATC TCAACAAAAA AACCGCTGGC TTGCAGCCGT CGGATTTGAT CATCGTCGCC GCGCGTCCGT CGATGGGTAA AACAACATTT GCGATGAACC TCGTCGAAAA CGCGGCGATG TTGCAGGATA AACCAGTACT TATCTTCTCG CTGGAGATGC CATCAGAACA GATTATGATG CGTTCTTTGG CGTCGCTGTC GCGCGTTGAC CAGACTAAAA TCCGTACCGG GCAGCTCGAT GATGAAGACT GGGCACGTAT TTCCGGCACC ATGGGTATTT TGCTCGAAAA ACGCAATATC TATATCGATG ACTCCTCCGG CCTGACGCCA ACGGAAGTGC GTTCCCGCGC ACGCCGTATT GCCCGTGAAC ACGGCGGCAT CGGGCTTATC ATGATCGACT ACCTGCAACT GATGCGCGTA CCGGCGCTTT CCGATAACCG TACGCTGGAA ATTGCAGAAA TCTCCCGCTC GCTGAAAGCA CTGGCGAAAG AACTGAACGT GCCGGTGGTG GCGCTGTCCC AGTTGAACCG TTCTCTGGAA CAACGTGCCG ACAAACGCCC GGTCAACTCC GACCTGCGTG AATCTGGCTC TATCGAGCAG GATGCGGACT TGATCATGTT TATCTATCGT GATGAGGTGT ATCACGAAAA CAGTGATTTA AAAGGCATCG CGGAAATTAT TATCGGTAAA CAACGTAACG GCCCAATCGG GACGGTACGC CTGACCTTTA ACGGTCAATG GTCGCGCTTC GACAACTATG CGGGGCCGCA GTACGACGAC GAATAA
|
Protein sequence | MAGNKPFNKQ QAEPRERDPQ VAGLKVPPHS IEAEQSVLGG LMLDNERWDD VAERVVADDF YTRPHRHIFT EMARLQESGS PIDLITLAES LERQGQLDSV GGFAYLAELS KNTPSAANIS AYADIVRERA VVREMISVAN EIAEAGFDPQ GRTSEDLLDL AESRVFKIAE SRANKDEGPK NIADVLDATV ARIEQLFQQP HDGVTGVNTG YDDLNKKTAG LQPSDLIIVA ARPSMGKTTF AMNLVENAAM LQDKPVLIFS LEMPSEQIMM RSLASLSRVD QTKIRTGQLD DEDWARISGT MGILLEKRNI YIDDSSGLTP TEVRSRARRI AREHGGIGLI MIDYLQLMRV PALSDNRTLE IAEISRSLKA LAKELNVPVV ALSQLNRSLE QRADKRPVNS DLRESGSIEQ DADLIMFIYR DEVYHENSDL KGIAEIIIGK QRNGPIGTVR LTFNGQWSRF DNYAGPQYDD E
|
| |