Gene EcSMS35_4508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4508 
Symbolzur 
ID6146300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4607037 
End bp4607552 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content52% 
IMG OID641619324 
Productzinc uptake transcriptional repressor 
Protein accessionYP_001746436 
Protein GI170683816 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA CCACAACGCA GGAGTTATTA GCGCAGGCTG AAAAAATCTG CGCGCAGCGT 
AATGTGCGCC TGACCCCACA GCGCCTGGAA GTGTTGCGCC TGATGAGTCT GCAGGATGGC
GCTATCAGCG CTTATGATCT GCTTGATTTG CTGCGCGAAG CTGAACCGCA AGCCAAGCCG
CCAACGGTTT ATCGCGCGCT GGATTTTCTG CTTGAGCAAG GTTTTGTGCA TAAGGTGGAA
TCCACCAACA GTTATGTGCT CTGTCATCTG TTCGACCAGC CCACGCATAC GTCAGCCATG
TTTATTTGCG ATCGCTGCGG CGCAGTGAAA GAAGAATGTG CAGAAGGCGT GGAAGACATT
ATGCATACGC TGGCGGCAAA AATGGGGTTT GCCCTGCGGC ATAATGTGAT TGAAGCACAT
GGACTCTGTG CGGCATGCGT GGAAGTGGAA GCGTGTCGTC ATCCTGAACA GTGCCAGCAT
GATCACTCTG TACAGGTGAA AAAGAAATCA CGTTAA
 
Protein sequence
MEKTTTQELL AQAEKICAQR NVRLTPQRLE VLRLMSLQDG AISAYDLLDL LREAEPQAKP 
PTVYRALDFL LEQGFVHKVE STNSYVLCHL FDQPTHTSAM FICDRCGAVK EECAEGVEDI
MHTLAAKMGF ALRHNVIEAH GLCAACVEVE ACRHPEQCQH DHSVQVKKKS R