| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4486 |
|---|
| Symbol | pgi |
|---|
| ID | 6143454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4583305 |
|---|
| End bp | 4584954 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641619302 |
|---|
| Product | glucose-6-phosphate isomerase |
|---|
| Protein accession | YP_001746414 |
|---|
| Protein GI | 170682424 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0166] Glucose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA TCAATCCAAC GCAGACCGCT GCCTGGCAGG CACTACAGAA ACACTTCGAT
GAAATGAAAG ACGTTACGAT CGCCGATCTT TTTGCTAAAG ACGGCGATCG TTTTTCTAAG
TTCTCCGTAA CCTTCGACGA TCAGATGCTG GTGGATTACT CCAAAAACCG CATCACTGAA
GAGACGCTGG CGAAATTACA AGATCTGGCG AAAGAGTGCG ATCTGGCGGG CGCGATTAAG
TCGATGTTCT CTGGCGAGAA GATCAACCGC ACTGAAAACC GCGCCGTACT GCACGTAGCG
CTGCGTAACC GTAGCAATAC CCCGATTCTG GTTGATGGCA AAGATGTTAT GCCGGAAGTC
AACGCGGTGC TGGAGAAGAT GAAAACCTTC TCGGAAGCGA TTATTTCCGG TGAGTGGAAA
GGCTATACCG GCAAAGCAAT CACTGACGTA GTGAACATCG GGATCGGTGG TTCTGACCTC
GGCCCGTACA TGGTGACCGA AGCACTGCGT CCGTACAAAA ACCACCTGAA CATGCACTTT
GTTTCTAACG TCGATGGGAC TCACATCGCG GAAGTGCTGA AAAAAGTAAA CCCGGAAACC
ACGCTGTTCC TGGTAGCATC TAAAACCTTC ACCACTCAGG AAACCATGAC CAACGCCCAT
AGCGCGCGTG ACTGGTTCCT GAAAGCGGCA GGTGATGAGA AACACGTTGC GAAACACTTT
GCGGCGCTTT CCACCAATGC CAAAGCCGTT GGCGAGTTTG GTATTGATAC TGCCAACATG
TTCGAATTCT GGGACTGGGT CGGCGGTCGT TACTCTTTGT GGTCAGCGAT TGGCCTGTCG
ATTGTTCTCT CCATCGGCTT TGATAACTTC GTTGAACTGC TTTCTGGCGC ACACGCGATG
GACAAGCATT TCTCCACCAC GCCTGCCGAG AAAAACCTGC CTGTCTTGCT GGCGCTGATT
GGCATCTGGT ACAACAATTT CTTTGGTGCG GAAACTGAAG CGATTCTGCC GTATGACCAG
TATATGCACC GTTTCGCGGC GTACTTCCAG CAGGGCAATA TGGAGTCCAA CGGTAAGTAT
GTTGACCGTA ACGGTAACGT TGTGGATTAC CAGACTGGCC CGATTATCTG GGGTGAACCA
GGTACTAACG GTCAGCACGC GTTCTACCAG CTGATCCACC AGGGAACCAA AATGGTACCG
TGCGATTTCA TCGCTCCGGC TATCACCCAT AACCCGCTCT CTGATCATCA CCAGAAACTG
CTGTCTAACT TCTTCGCTCA GACCGAAGCG CTGGCGTTTG GTAAATCCCG CGAAGTGGTT
GAGCAGGAAT ATCGCGATCA GGGTAAAGAT CCGGCAACGC TTGACTACGT GGTGCCGTTC
AAAGTGTTCG AAGGTAACCG CCCGACCAAC TCCATCCTGC TGCGTGAAAT CACTCCGTTC
AGCCTGGGTG CGTTGATTGC GCTGTATGAG CACAAAATCT TTACTCAGGG CGTGATCCTG
AACATCTTCA CCTTCGACCA GTGGGGCGTG GAGCTGGGTA AACAACTGGC GAACCGTATT
CTGCCAGAGC TGAAAGATGA CAAAGAAATC AGCAGCCACG ATAGCTCGAC CAATGGTCTG
ATTAACCGCT ATAAAGCGTG GCGCGGTTAA
|
|---|
| Protein sequence | MKNINPTQTA AWQALQKHFD EMKDVTIADL FAKDGDRFSK FSVTFDDQML VDYSKNRITE
ETLAKLQDLA KECDLAGAIK SMFSGEKINR TENRAVLHVA LRNRSNTPIL VDGKDVMPEV
NAVLEKMKTF SEAIISGEWK GYTGKAITDV VNIGIGGSDL GPYMVTEALR PYKNHLNMHF
VSNVDGTHIA EVLKKVNPET TLFLVASKTF TTQETMTNAH SARDWFLKAA GDEKHVAKHF
AALSTNAKAV GEFGIDTANM FEFWDWVGGR YSLWSAIGLS IVLSIGFDNF VELLSGAHAM
DKHFSTTPAE KNLPVLLALI GIWYNNFFGA ETEAILPYDQ YMHRFAAYFQ QGNMESNGKY
VDRNGNVVDY QTGPIIWGEP GTNGQHAFYQ LIHQGTKMVP CDFIAPAITH NPLSDHHQKL
LSNFFAQTEA LAFGKSREVV EQEYRDQGKD PATLDYVVPF KVFEGNRPTN SILLREITPF
SLGALIALYE HKIFTQGVIL NIFTFDQWGV ELGKQLANRI LPELKDDKEI SSHDSSTNGL
INRYKAWRG
|
|---|
| |