| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4483 |
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| Symbol | rluF |
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| ID | 6143901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4580033 |
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| End bp | 4580905 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641619299 |
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| Product | 23S rRNA pseudouridine synthase F |
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| Protein accession | YP_001746411 |
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| Protein GI | 170682433 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.429263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCCG ACTCATCAGT CCGTTTAAAT AAATACATCA GCGAAAGCGG AATTTGCTCA
CGCCGCGAAG CGGATCGCTA TATCGAGCAA GGCAATGTGT TCCTTAATGG CAAGCGAGCC
ACCATTGGCG ATCAGGTGAA ACCCGGCGAC GTTGTGAAAG TAAACGGTCA GTTGATTGAG
CCTCGGGAAG CCGAAGATTT GGTACTTATC GCCCTGAACA AGCCCGTCGG TATTGTCAGC
ACCACCGAAG ATGGCGAGCG CGATAACATT GTCGATTTCG TTAACCACAG CAAACGCGTG
TTCCCGATTG GCCGCCTGGA TAAAGATTCC CAGGGGCTGA TTTTCCTCAC CAATCACGGC
GATCTGGTGA ATAAGATCCT CCGTGCGGGT AACGATCATG AGAAAGAGTA TCTGGTGACG
GTTGATAAAC CGATTACCGA TGAATTTATT CGTGGTATGG GGGCGGGAGT ACCGATCCTC
GGGACGGTGA CGAAAAAGTG CAAAGTCAAA AAAGAAGCGC CGTTTGTCTT CCGCATTACC
CTGGTGCAGG GGCTGAACCG TCAGATCCGT CGCATGTGCG AGCACTTTGG TTACGAAGTG
AAAAAGCTGG AACGTACGCG CATTATGAAC GTCAGTTTAA GCGGCATTCC GCTGGGTGAG
TGGCGCGATT TAACCGACGA TGAGTTAATC GACCTCTTTA AGCTCATCGA AAATTCCTCT
TCCGAGGCAA AACCTAAAGC GAAGGCCAAG CCGAAAACGG TAGGCATCAA ACGTCCAGTC
GTCAAGATGG AAAAAACGGC GGAAAAAGGC GGTCGCCCGG CGTCCAACGG TAAGCGTTTT
ACCTCGCCGG GGCGAAAAAA GAAGGGACGT TAA
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| Protein sequence | MLPDSSVRLN KYISESGICS RREADRYIEQ GNVFLNGKRA TIGDQVKPGD VVKVNGQLIE
PREAEDLVLI ALNKPVGIVS TTEDGERDNI VDFVNHSKRV FPIGRLDKDS QGLIFLTNHG
DLVNKILRAG NDHEKEYLVT VDKPITDEFI RGMGAGVPIL GTVTKKCKVK KEAPFVFRIT
LVQGLNRQIR RMCEHFGYEV KKLERTRIMN VSLSGIPLGE WRDLTDDELI DLFKLIENSS
SEAKPKAKAK PKTVGIKRPV VKMEKTAEKG GRPASNGKRF TSPGRKKKGR
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