| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4482 |
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| Symbol | sorC |
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| ID | 6145562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4578738 |
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| End bp | 4579685 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641619298 |
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| Product | sorbitol operon regulator SorC |
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| Protein accession | YP_001746410 |
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| Protein GI | 170679743 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.543234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACA GTGACGATAT CCGTTTGATT GTGAAGATTG CCCAACTCTA TTACGAACAG
GATATGACGC AGGCGCAAAT CGCGCGCGAA CTGGGTATTT ACCGCACCAC CATCAGCCGC
TTGCTTAAAC GAGGCCGCGA TCAGGGAATT GTCACCATCG CCATCAACTA TGACTACAAC
GAAAATCTCT GGCTGGAGCA GCAACTGAAG CAAAAGTTTG GCCTGAAAGA CGTTGTGGTG
GTGTCGGGAA ATGATGAGGA TGAAGAGACT CAACTGGCGA TGATGGGGTT ACACGGCGCG
CAACTGCTGG ATCGCTTGCT GGAACCTGGC GATATTGTCG GTTTTTCCTG GGGCCGCGCG
GTGAGCGCAC TGGTTGAAAA CTTGCCGCAG GCGGGGCAAT CGCGGCAGTT AATTTGCGTG
CCGATTATTG GCGGCCCGTC CGGTAAACTC GAAAGCCGCT ATCACGTAAA CACATTAACC
TACAGCGCGG CAGCGAAGCT GAAAGGGGAA TCGCATCTCG CGGATTTTCC GGCTCTGCTG
GATAACCCAT TAATTCGTAA TGGGATCATG CAGTCTCAGC ACTTTAAAAC CATCTCTGCC
TACTGGGATA ATCTGGATGT CGCCCTGGTG GGAATTGGCT CACCGGCCAT TCGCGACGGC
GCTAACTGGC ATGCGTTTTA TGGTGGTGAA GAGAGTGACG ACCTGAATGC CCGCCAGGTT
GCTGGCGATA TTTGCTCGCG CTTTTTTGAT ATTCACGGCG CAATGGTTGA AACGAATATG
AGCGAAAAAA CACTCTCTAT CGAAATGAAT AAATTAAAGC AGGCACGGTA TTCCATTGGC
ATTGCCATGA GCGAAGAAAA ATACAGCGGA ATTGTTGGTG CACTGCGTGG AAAATATATT
AATTGTCTGG TAACGAATAG CAGCACAGCT GAACTATTAC TGAAATAA
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| Protein sequence | MENSDDIRLI VKIAQLYYEQ DMTQAQIARE LGIYRTTISR LLKRGRDQGI VTIAINYDYN
ENLWLEQQLK QKFGLKDVVV VSGNDEDEET QLAMMGLHGA QLLDRLLEPG DIVGFSWGRA
VSALVENLPQ AGQSRQLICV PIIGGPSGKL ESRYHVNTLT YSAAAKLKGE SHLADFPALL
DNPLIRNGIM QSQHFKTISA YWDNLDVALV GIGSPAIRDG ANWHAFYGGE ESDDLNARQV
AGDICSRFFD IHGAMVETNM SEKTLSIEMN KLKQARYSIG IAMSEEKYSG IVGALRGKYI
NCLVTNSSTA ELLLK
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