| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4478 |
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| Symbol | |
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| ID | 6142882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4576088 |
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| End bp | 4576885 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641619294 |
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| Product | PTS system mannose/fructose/sorbose family IIC subunit |
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| Protein accession | YP_001746406 |
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| Protein GI | 170684109 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
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| TIGRFAM ID | [TIGR00822] PTS system, mannose/fructose/sorbose family, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.274968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATAA GTACCCTACA AATTATTGCT ATATTTCTTT TTTCCTGTAT TGCCGGAATG
GGCAGCGTGC TGGATGAATT TCAGACTCAT CGTCCGTTAA TTGCCTGTAC GGTGATTGGT
TTAATTCTCG GTGATTTAAA AACCGGAATT ATGCTCGGTG GTACGCTGGA ATTGATAGCT
CTCGGCTGGA TGAACGTCGG CGCGGCGCAA TCTCCGGATT CTGCACTCGC CAGCATAATC
TCCGCCATTC TGGTTATCGT TGGTCAGCAA AGCATCGCCA CCGGAATCGC CATCGCGTTG
CCTGTGGCTG CGGCAGGCCA GGTGCTGACG GTGTTTGCCC GTACCATCAC AGTAGTGTTC
CAGCACGCGG CGGATAAAGC AGCAGAAGAG GCGCGGTTTC GCACTCTCGA TATTCTGCAT
GTCTCCGCGC TTGGCGTGCA GGCGCTGCGC GTTGCTATTC CGGCACTGAT TGTCTCGCTG
TTCGTCAGCG CCGATATGGT GAGCAATATG CTGAGCGCCA TTCCCGAATT TGTGACCCGT
GGACTGCAGA TTGCTGGCGG TTTTATCGTG GTGGTCGGTT ACGCCATGGT GCTTCGCATG
ATGGGCGTGA AATATTTGAT GCCTTTCTTT TTCCTCGGTT TCCTCGCAGG TGGCTACCTC
GATCTCAGTC TGCTGGCGTT CGGTGGCGTC GGCGTGATCA TGGCCCTGCT CTACATCCAG
TTAAATCCAC AGTGGCGTAA AGCTGAACCA CATCCCCAGA CCACCACTAT CACCGCCCTT
GACCAACTTG ATGATTAA
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| Protein sequence | MEISTLQIIA IFLFSCIAGM GSVLDEFQTH RPLIACTVIG LILGDLKTGI MLGGTLELIA
LGWMNVGAAQ SPDSALASII SAILVIVGQQ SIATGIAIAL PVAAAGQVLT VFARTITVVF
QHAADKAAEE ARFRTLDILH VSALGVQALR VAIPALIVSL FVSADMVSNM LSAIPEFVTR
GLQIAGGFIV VVGYAMVLRM MGVKYLMPFF FLGFLAGGYL DLSLLAFGGV GVIMALLYIQ
LNPQWRKAEP HPQTTTITAL DQLDD
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