Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4464 |
Symbol | |
ID | 6145341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4558033 |
End bp | 4558344 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641619281 |
Product | IS3 family transposase orfA |
Protein accession | YP_001746393 |
Protein GI | 170683727 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2963] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0436168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.00706078 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAAGA AAACCAAACG TACTTTCACC CCTGAGTTCA GGCTGGAATG TGCACAGCTG ATTGTTGATA AGGGCTATTC GTATCGACAA GCCAGTGAGG CGATGAATGT CGGTTCTACC ACGCTTGAGA GCTGGGTACG TCAGCTCAGG CGAGAGCGCC AAGGTATTGC GCCCTCTGCA ACACCCATTA CCCCTGAACA GCAACGTATT CGCGAGCTGG AAAAGCAGGT TCGCCGACTG GAGGAACAAA ATACGATATT AAAAAAGGCT ACCGCGCTCT TGATGTCCGA CTCACTGAAC GGTTTACGAT AG
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Protein sequence | MNKKTKRTFT PEFRLECAQL IVDKGYSYRQ ASEAMNVGST TLESWVRQLR RERQGIAPSA TPITPEQQRI RELEKQVRRL EEQNTILKKA TALLMSDSLN GLR
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