Gene EcSMS35_4464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4464 
Symbol 
ID6145341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4558033 
End bp4558344 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content50% 
IMG OID641619281 
ProductIS3 family transposase orfA 
Protein accessionYP_001746393 
Protein GI170683727 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0436168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00706078 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAAGA AAACCAAACG TACTTTCACC CCTGAGTTCA GGCTGGAATG TGCACAGCTG 
ATTGTTGATA AGGGCTATTC GTATCGACAA GCCAGTGAGG CGATGAATGT CGGTTCTACC
ACGCTTGAGA GCTGGGTACG TCAGCTCAGG CGAGAGCGCC AAGGTATTGC GCCCTCTGCA
ACACCCATTA CCCCTGAACA GCAACGTATT CGCGAGCTGG AAAAGCAGGT TCGCCGACTG
GAGGAACAAA ATACGATATT AAAAAAGGCT ACCGCGCTCT TGATGTCCGA CTCACTGAAC
GGTTTACGAT AG
 
Protein sequence
MNKKTKRTFT PEFRLECAQL IVDKGYSYRQ ASEAMNVGST TLESWVRQLR RERQGIAPSA 
TPITPEQQRI RELEKQVRRL EEQNTILKKA TALLMSDSLN GLR