Gene EcSMS35_4450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4450 
SymbolzraP 
ID6146730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4545794 
End bp4546213 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content51% 
IMG OID641619270 
Productzinc resistance protein 
Protein accessionYP_001746386 
Protein GI170684083 
COG category[N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.353323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00183369 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACGGA ACACGAAAAT TGCCCTGGTA ATGATGGCGC TTTCAGCAAT GGCGATGGGA 
TCGACATCGG CATTTGCTCA CGGCGGACAT GGTATGTGGC AGCAAAATGC CGCGCCTTTG
ACCAGCGAAC AACAGACAGT CTGGCAAAAA ATTCATAATG ACTTTTACGC CCAAAGCAGC
GTGCTGCAAC AAAAACTGGT GACGAAGCGT TATGAATACA ACGCGTTGTT AGCCGCGAAC
CCACCGGATA GCAGCAAAAT CAATGCCGTT GCTAAAGAGA TGGAAACGCT GCGTCAATCA
TTAGACGAGT TACGGGTTAA ACGCGATATT GCGATGGCTG AAGCGGGTAT CCCGCGCGGT
TGCGGTATGG GTTACGGTGG TTGCGATGGT GGCGGTCATA TGGGTATGGG CCACTGGTAA
 
Protein sequence
MKRNTKIALV MMALSAMAMG STSAFAHGGH GMWQQNAAPL TSEQQTVWQK IHNDFYAQSS 
VLQQKLVTKR YEYNALLAAN PPDSSKINAV AKEMETLRQS LDELRVKRDI AMAEAGIPRG
CGMGYGGCDG GGHMGMGHW