| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4442 |
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| Symbol | thiC |
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| ID | 6144890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4538735 |
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| End bp | 4540630 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641619262 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001746378 |
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| Protein GI | 170680038 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.000546852 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGCAA CAAAACTGAC CCGCCGCGAA CAACGCGCCC AGGCCCAACA TTTTATCGAC
ACCCTGGAAG GCACCGCCTT TCCAAACTCA AAACGCATTT ACATCACCGG CACACAACCC
GGCGTGCGCG TGCCGATGCG TGAGATCCAG CTTAGCCCGA CGCTAATCGG CGGTAGCAAA
GAACAGCCGC AGTACGAAGA AAACGAAGCG ATTCCGGTCT ACGACGCCTC CGGCCCGTAT
GGCGATCCGC AGATTGCCAT TAACGTGCAG CAAGGGCTGG CAAAACTACG CCAGCCGTGG
ATCGATGCGC GCGGCGATAC CGAAGAACTT ACCGTGCGCA GTTCCGATTA CACTAAAGCG
CGACTGGCAG ATGATGGCCT CGACGAGCTA CGTTTTAGCG GCGTATTAAC CCCAAAGCGC
GCCAAAGCAG GACGCCGCGT CACCCAACTG CACTACGCCC GCCGGGGCAT CATCACGCCC
GAAATGGAAT TCATCGCCAT TCGCGAGAAT ATGGGTCGCG AGCGCATACG TAGCGAAGTT
TTGCGCCACC AGCATCCGGG AATGAGCTTT GGCGCACGTC TGCCGGAAAA TATCACTGCG
GAATTTGTCC GTGATGAAGT TGCTGCCGGA CGTGCGATTA TCCCGGCCAA CATTAATCAT
CCGGAATCGG AGCCGATGAT TATTGGTCGC AATTTCCTGG TAAAAGTTAA CGCCAATATC
GGCAACTCGG CGGTCACCTC TTCCATCGAA GAAGAAGTGG AAAAGCTGGT ATGGTCCACG
CGCTGGGGAG CGGATACGGT GATGGATCTC TCCACCGGTC GCTATATTCA CGAAACCCGC
GAGTGGATTT TGCGTAACAG CCCGGTGCCG ATCGGTACAG TGCCGATCTA CCAGGCGCTG
GAGAAGGTTA ACGGGATCGC CGAAGATCTT ACCTGGGAAG CGTTCCGCGA CACGCTGCTG
GAACAAGCCG AGCAAGGTGT GGATTACTTC ACTATCCATG CGGGCGTACT GCTGCGCTAT
GTGCCGATGA CCGCGAAACG CCTGACTGGT ATCGTCTCTC GCGGCGGTTC GATTATGGCG
AAATGGTGCC TCTCCCATCA TCAGGAAAAT TTCCTCTATC AACACTTCCG CGAAATTTGT
GAAATCTGTG CCGCTTATGA CGTTTCGCTG TCGCTGGGCG ACGGTCTGCG CCCCGGTTCT
GTTCAGGACG CCAACGATGA AGCGCAATTT GCCGAGCTGC ATACGCTGGG TGAACTGACC
AAAATCGCCT GGGAATATGA CGTACAGGTG ATGATTGAAG GCCCAGGCCA CGTGCCGATG
CAGATGATCC GCCGCAATAT GACCGAGGAG TTAGAGCAAT GCCACGAAGC GCCGTTTTAC
ACTCTGGGGC CGCTAACTAC CGATATCGCG CCGGGTTATG ACCACTTCAC GTCGGGGATT
GGTGCGGCGA TGATTGGCTG GTTTGGCTGC GCGATGCTCT GTTACGTAAC GCCGAAAGAG
CATCTGGGCC TGCCAAATAA AGAAGATGTT AAACAAGGGC TTATCACCTA TAAGATTGCC
GCTCACGCCG CCGACCTGGC GAAAGGGCAT CCGGGCGCGC AAATTCGCGA TAACGCCATG
TCGAAAGCCC GCTTCGAATT TCGCTGGGAA GACCAGTTTA ATCTGGCCCT CGACCCGTTT
ACTGCCCGCG CTTATCACGA TGAAACCCTG CCGCAAGAGT CCGGTAAAGT CGCCCATTTT
TGCTCCATGT GTGGACCGAA ATTCTGCTCG ATGAAAATCA GCCAGGAAGT GCGTGATTAC
GCCGCCGCGC AAACCATTGA AGTGGGAATG GCGGATATGT CGGAGAACTT CCGCGCCAGA
GGCGGAGAAA TCTACCTGCG TAAGGAGGAA GCGTGA
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| Protein sequence | MSATKLTRRE QRAQAQHFID TLEGTAFPNS KRIYITGTQP GVRVPMREIQ LSPTLIGGSK
EQPQYEENEA IPVYDASGPY GDPQIAINVQ QGLAKLRQPW IDARGDTEEL TVRSSDYTKA
RLADDGLDEL RFSGVLTPKR AKAGRRVTQL HYARRGIITP EMEFIAIREN MGRERIRSEV
LRHQHPGMSF GARLPENITA EFVRDEVAAG RAIIPANINH PESEPMIIGR NFLVKVNANI
GNSAVTSSIE EEVEKLVWST RWGADTVMDL STGRYIHETR EWILRNSPVP IGTVPIYQAL
EKVNGIAEDL TWEAFRDTLL EQAEQGVDYF TIHAGVLLRY VPMTAKRLTG IVSRGGSIMA
KWCLSHHQEN FLYQHFREIC EICAAYDVSL SLGDGLRPGS VQDANDEAQF AELHTLGELT
KIAWEYDVQV MIEGPGHVPM QMIRRNMTEE LEQCHEAPFY TLGPLTTDIA PGYDHFTSGI
GAAMIGWFGC AMLCYVTPKE HLGLPNKEDV KQGLITYKIA AHAADLAKGH PGAQIRDNAM
SKARFEFRWE DQFNLALDPF TARAYHDETL PQESGKVAHF CSMCGPKFCS MKISQEVRDY
AAAQTIEVGM ADMSENFRAR GGEIYLRKEE A
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