Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4433 |
Symbol | rplJ |
ID | 6146439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4525447 |
End bp | 4525944 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641619253 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_001746369 |
Protein GI | 170683724 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000818528 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00000264015 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTTTAA ATCTTCAAGA CAAACAAGCG ATTGTTGCTG AAGTCAGCGA AGTAGCCAAA GGCGCGCTGT CTGCAGTAGT TGCGGATTCC CGTGGCGTAA CTGTAGATAA AATGACTGAA CTGCGTAAAG CAGGTCGCGA AGCTGGCGTA TACATGCGTG TTGTTCGTAA CACCCTGCTG CGCCGTGCTG TTGAAGGTAC TCCGTTCGAG TGCCTGAAAG ACGCGTTTGT TGGTCCGACC CTGATTGCAT ACTCTATGGA ACACCCGGGC GCTGCTGCTC GTCTGTTCAA AGAGTTCGCG AAAGCGAATG CAAAATTTGA GGTCAAAGCC GCTGCCTTTG AAGGTGAGCT GATCCCGGCG TCTCAGATCG ACCGCCTGGC AACTCTGCCG ACCTACGAAG AAGCAATTGC ACGCCTGATG GCAACCATGA AAGAAGCTTC GGCTGGCAAA CTGGTTCGTA CTCTGGCTGC TGTACGCGAT GCGAAAGAAG CTGCTTAA
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Protein sequence | MALNLQDKQA IVAEVSEVAK GALSAVVADS RGVTVDKMTE LRKAGREAGV YMRVVRNTLL RRAVEGTPFE CLKDAFVGPT LIAYSMEHPG AAARLFKEFA KANAKFEVKA AAFEGELIPA SQIDRLATLP TYEEAIARLM ATMKEASAGK LVRTLAAVRD AKEAA
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