Gene EcSMS35_4433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4433 
SymbolrplJ 
ID6146439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4525447 
End bp4525944 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content52% 
IMG OID641619253 
Product50S ribosomal protein L10 
Protein accessionYP_001746369 
Protein GI170683724 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000818528 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00000264015 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTTAA ATCTTCAAGA CAAACAAGCG ATTGTTGCTG AAGTCAGCGA AGTAGCCAAA 
GGCGCGCTGT CTGCAGTAGT TGCGGATTCC CGTGGCGTAA CTGTAGATAA AATGACTGAA
CTGCGTAAAG CAGGTCGCGA AGCTGGCGTA TACATGCGTG TTGTTCGTAA CACCCTGCTG
CGCCGTGCTG TTGAAGGTAC TCCGTTCGAG TGCCTGAAAG ACGCGTTTGT TGGTCCGACC
CTGATTGCAT ACTCTATGGA ACACCCGGGC GCTGCTGCTC GTCTGTTCAA AGAGTTCGCG
AAAGCGAATG CAAAATTTGA GGTCAAAGCC GCTGCCTTTG AAGGTGAGCT GATCCCGGCG
TCTCAGATCG ACCGCCTGGC AACTCTGCCG ACCTACGAAG AAGCAATTGC ACGCCTGATG
GCAACCATGA AAGAAGCTTC GGCTGGCAAA CTGGTTCGTA CTCTGGCTGC TGTACGCGAT
GCGAAAGAAG CTGCTTAA
 
Protein sequence
MALNLQDKQA IVAEVSEVAK GALSAVVADS RGVTVDKMTE LRKAGREAGV YMRVVRNTLL 
RRAVEGTPFE CLKDAFVGPT LIAYSMEHPG AAARLFKEFA KANAKFEVKA AAFEGELIPA
SQIDRLATLP TYEEAIARLM ATMKEASAGK LVRTLAAVRD AKEAA