| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4432 |
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| Symbol | rplA |
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| ID | 6145216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4524451 |
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| End bp | 4525155 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641619252 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001746368 |
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| Protein GI | 170682240 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000639921 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0000029085 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAAAC TGACCAAGCG CATGCGTGTT ATCCGCGAGA AAGTTGATGC AACCAAACAG
TACGACATCA ACGAAGCTAT CGCTCTGCTG AAAGAACTGG CGACTGCTAA ATTCGTAGAA
AGCGTGGACG TAGCTGTTAA CCTCGGCATC GACGCTCGTA AATCTGACCA GAACGTACGT
GGTGCAACTG TACTGCCGCA CGGTACTGGC CGTTCCGTTC GCGTAGCCGT ATTTACCCAG
GGTGCAAACG CTGAAGCTGC TAAAGCTGCA GGTGCTGAAC TGGTAGGTAT GGAAGATCTG
GCTGACCAGA TCAAGAAAGG CGAAATGAAC TTTGACGTTG TTATTGCTTC TCCGGATGCA
ATGCGCGTTG TTGGCCAGCT GGGCCAGGTT CTGGGTCCGC GCGGCCTGAT GCCAAACCCG
AAAGTGGGTA CTGTAACGCC GAACGTTGCT GAAGCGGTTA AAAACGCTAA AGCTGGCCAG
GTTCGTTACC GTAACGACAA AAACGGCATC ATCCACACCA CCATCGGTAA AGTGGACTTT
GACGCTGACA AACTGAAAGA AAACCTGGAA GCTCTGCTGG TTGCGCTGAA AAAAGCAAAA
CCGACTCAGG CGAAAGGCGT GTACATCAAG AAAGTTAGCA TCTCCACCAC CATGGGTGCA
GGTGTTGCAG TTGACCAGGC TGGCCTGAGC GCTTCTGTAA ACTAA
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| Protein sequence | MAKLTKRMRV IREKVDATKQ YDINEAIALL KELATAKFVE SVDVAVNLGI DARKSDQNVR
GATVLPHGTG RSVRVAVFTQ GANAEAAKAA GAELVGMEDL ADQIKKGEMN FDVVIASPDA
MRVVGQLGQV LGPRGLMPNP KVGTVTPNVA EAVKNAKAGQ VRYRNDKNGI IHTTIGKVDF
DADKLKENLE ALLVALKKAK PTQAKGVYIK KVSISTTMGA GVAVDQAGLS ASVN
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