| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4404 |
|---|
| Symbol | argE |
|---|
| ID | 6147257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4499519 |
|---|
| End bp | 4500670 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641619225 |
|---|
| Product | acetylornithine deacetylase |
|---|
| Protein accession | YP_001746349 |
|---|
| Protein GI | 170680148 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.268381 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA AATTACCGCC ATTTATCGAG ATTTACCGTG CTCTGATTGC CACACCTTCA
ATAAGCGCCA CGGAAGAGGC ACTCGATCAA AGCAATGCAG ATTTAATCAC TCTGCTGGCG
GACTGGTTTA AAGATTTAGG CTTCAATGTG GAAGTGCAGC CTGTGCCAGG AACTCGCAAC
AAATTTAATA TGCTGGCAAG TACCGGACAG GGGGCTGGCG GTTTGTTGCT GGCGGGGCAT
ACCGATACGG TGCCATTTGA TGACGGACGC TGGACGCGCG ATCCGTTTAC ACTGACGGAG
CATGACGGCA AGCTTTACGG CTTAGGCACC GCCGACATGA AAGGCTTTTT TGCGTTTATC
CTTGATGCGC TACGCGATGT CGACGTCACG AAGCTTGCAA AACCGCTCTA CATTCTGGCG
ACTGCCGATG AAGAAACCAG TATGGCCGGA GCGCGTTATT TTGCCGAAAC TACCGCCCTG
CGCCCGGATT GCGCCATCAT TGGCGAGCCA ACGTCGCTGC AACCGGTACG CGCCCATAAA
GGTCATATCT CTAACGCCAT CCGTATTCAG GGCCAGTCGG GCCACTCCAG CGATCCAGCA
CGCGGAGTTA ACGCTATCGA ACTGATGCAC GACGCCATCG GGCATATTTT GCAATTGCGC
GATAAGCTGA AAGAACGTTA TCACTATGAA GCGTTTACCG TGCCATACCC CACGCTCAAC
CTCGGGCATA TTCACGGTGG CGACGCTTCT AACCGTATTT GTGCTTGCTG TGAGTTGCAT
ATGGATATTC GTCCGCTGCC GGGCATGACA CTCAATGAAC TTAATGGCCT ACTCAACGAT
GCGCTGGCTC CGGTGAGCGA ACGCTGGCCG GGTCGTCTGA CGGTCGACGA GCTGCATCCG
CCGATCCCTG GCTATGAATG CCCGCCAAAT CATCAACTGG TTGAAGTAGT TGAGAAATTG
CTCGGAGCAA AGACCGAAGT GGTGAATTAC TGTACCGAAG CGCCGTTTAT TCAAACGTTA
TGCCCGACGC TGGTTCTGGG TCCTGGCTCA ATTAATCAGG CTCATCAACC TGATGAATAT
CTGGAAACAC GGTTTATCAA GCCCACCCGC GAACTGATCA CCCAGGTGAT TCACCATTTT
TGCTGGCATT AA
|
|---|
| Protein sequence | MKNKLPPFIE IYRALIATPS ISATEEALDQ SNADLITLLA DWFKDLGFNV EVQPVPGTRN
KFNMLASTGQ GAGGLLLAGH TDTVPFDDGR WTRDPFTLTE HDGKLYGLGT ADMKGFFAFI
LDALRDVDVT KLAKPLYILA TADEETSMAG ARYFAETTAL RPDCAIIGEP TSLQPVRAHK
GHISNAIRIQ GQSGHSSDPA RGVNAIELMH DAIGHILQLR DKLKERYHYE AFTVPYPTLN
LGHIHGGDAS NRICACCELH MDIRPLPGMT LNELNGLLND ALAPVSERWP GRLTVDELHP
PIPGYECPPN HQLVEVVEKL LGAKTEVVNY CTEAPFIQTL CPTLVLGPGS INQAHQPDEY
LETRFIKPTR ELITQVIHHF CWH
|
|---|
| |