Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4373 |
Symbol | hslU |
ID | 6146544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4459281 |
End bp | 4460612 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641619194 |
Product | ATP-dependent protease ATP-binding subunit HslU |
Protein accession | YP_001746318 |
Protein GI | 170683012 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.611238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAA TGACCCCACG CGAAATCGTC AGCGAACTGG ATAAGCACAT CATCGGCCAG GACAACGCCA AGCGTTCTGT GGCGATTGCT CTGCGTAACC GCTGGCGTCG CATGCAGCTC AACGAAGAGC TGCGCCATGA AGTGACCCCG AAAAATATCC TGATGATCGG CCCGACCGGT GTCGGTAAAA CTGAAATCGC CCGTCGTCTG GCTAAGCTGG CGAATGCGCC GTTCATCAAA GTTGAAGCGA CCAAATTCAC CGAAGTGGGC TATGTCGGTA AGGAAGTGGA TTCTATTATT CGCGATCTGA CCGATGCCGC CGTGAAAATG GTACGCGTCC AGGCTATCGA GAAAAACCGT TATCGCGCTG AAGAACTGGC AGAAGAACGT ATTCTCGACG TGCTGATCCC ACCTGCTAAA AACAACTGGG GACAGACCGA ACAGCAGCAG GAACCGTCCG CTGCTCGTCA GGCATTCCGC AAAAAACTGC GTGAAGGCCA GCTTGATGAC AAAGAAATCG AGATCGATCT TGCCGCAGCA CCGATGGGCG TTGAAATTAT GGCTCCTCCG GGCATGGAAG AGATGACCAG CCAGCTGCAG TCCATGTTCC AGAACCTGGG CGGTCAGAAG CAAAAAGCGC GTAAGCTGAA AATCAAAGAC GCCATGAAGC TGCTGATTGA AGAAGAAGCG GCGAAACTGG TGAACCCGGA AGAGCTGAAG CAAGATGCTA TCGACGCTGT TGAGCAGCAC GGGATCGTGT TTATCGACGA AATCGACAAA ATCTGTAAGC GCGGCGAGTC TTCCGGTCCG GATGTTTCTC GTGAAGGCGT TCAGCGTGAC CTGCTGCCGC TGGTAGAAGG TTGCACTGTT TCCACCAAAC ACGGGATGGT CAAAACTGAC CACATTCTGT TTATCGCTTC TGGCGCGTTC CAGATTGCGA AACCGTCTGA CCTGATCCCG GAACTGCAAG GTCGTCTGCC AATCCGCGTT GAGCTGCAGG CACTGACCAC CAGCGACTTC GAGCGTATTC TGACCGAGCC GAATGCCTCT ATCACCGTGC AGTACAAAGC ATTGATGGCG ACTGAAGGCG TAAATATCGA GTTCACCGAC TCCGGTATTA AGCGGATCGC GGAAGCAGCA TGGCAGGTGA ACGAATCTAC CGAAAACATC GGTGCTCGTC GTTTACATAC TGTTCTGGAG CGTTTAATGG AAGAGATTTC CTACGACGCC AGCGATTTAA GCGGTCAAAC CATCACTATT GACGCAGATT ATGTGAGCAA ACATCTGGAT GCGTTGGTGG CAGATGAAGA TCTGAGCCGT TTTATCCTAT AA
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Protein sequence | MSEMTPREIV SELDKHIIGQ DNAKRSVAIA LRNRWRRMQL NEELRHEVTP KNILMIGPTG VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVDSII RDLTDAAVKM VRVQAIEKNR YRAEELAEER ILDVLIPPAK NNWGQTEQQQ EPSAARQAFR KKLREGQLDD KEIEIDLAAA PMGVEIMAPP GMEEMTSQLQ SMFQNLGGQK QKARKLKIKD AMKLLIEEEA AKLVNPEELK QDAIDAVEQH GIVFIDEIDK ICKRGESSGP DVSREGVQRD LLPLVEGCTV STKHGMVKTD HILFIASGAF QIAKPSDLIP ELQGRLPIRV ELQALTTSDF ERILTEPNAS ITVQYKALMA TEGVNIEFTD SGIKRIAEAA WQVNESTENI GARRLHTVLE RLMEEISYDA SDLSGQTITI DADYVSKHLD ALVADEDLSR FIL
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