| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4350 |
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| Symbol | gpU |
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| ID | 6143149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4440279 |
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| End bp | 4440758 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641619171 |
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| Product | phage protein gpU |
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| Protein accession | YP_001746295 |
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| Protein GI | 170684272 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3499] Phage protein U |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.356876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCTCG CGTTAGGTAT GTTTGTTTTT ATGCGCCAGA CGCTGCCACA CCAGACCATG
CAGCGCGAAT CAGATTATCG CTGGCCGTCA AATTCCCGTA TCGGTAAACG GGATGCCTTT
CAGTTTCTCG GTGTGGGTGA GGAAAACATT ACGCTTGCCG GCGTGCTTTA TCCCGAACTG
ACCGGCGGCA AGCTGACGAT GACCACGCTC AGGCTGATGG CAGAGGAAGG CCGGGCGTGG
CCGTTGCTGG ATGGCACAGG CATGATTTAC GGCATGTATG TCATCAGCAA GGTGAGTGAA
ACAGGGAGTA TTTTCTTTGC AGACGGCACA CCCCGAAAAA TTGATTTTAC GCTGTCGCTC
ACCCGCGTTG ATGAATCACT GGCCGCGCTT TATGGCGATA TCGGTAAACA GGCGGAGTCG
CTCATCGGTA AGGCCGGTAG TCTGGCGACC AGATTCACGG GGATGACGGG GGCGGAATAA
|
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| Protein sequence | MMLALGMFVF MRQTLPHQTM QRESDYRWPS NSRIGKRDAF QFLGVGEENI TLAGVLYPEL
TGGKLTMTTL RLMAEEGRAW PLLDGTGMIY GMYVISKVSE TGSIFFADGT PRKIDFTLSL
TRVDESLAAL YGDIGKQAES LIGKAGSLAT RFTGMTGAE
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