| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4349 |
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| Symbol | |
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| ID | 6142615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4437817 |
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| End bp | 4440264 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641619170 |
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| Product | TP901 family phage tail tape measure protein |
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| Protein accession | YP_001746294 |
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| Protein GI | 170683855 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.186092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACA ATGTAAAATT ACAGGTATTG CTCAGGGCTG TTGACCAGGC ATCCCGCCCG
TTTAAATCCA TCCGCACAGC GAGCAAATCG CTGTCGGGGG ATATCCGGGA AACACAAAAA
TCACTGCGTG AGCTGAACGG TCAGGCATCC CGTATTGAGG GATTTCGCAA GACCAGTGCA
CAGCTCGCCG TGACTGGTCA TGCACTTGAA AAGGCACGGC AGGAGGCCGA AGCCCTTGCC
ACACAGTTTA AAAACACCGA ACGTCCGACA CGTGCTCAGG CGAAAGTGCT GGAATCCGCG
AAGCGTGCGG CGGAGGACTT ACAGGCGAAA TATAACCGCC TGACGGATTC CGTTAAACGC
CAGCAGCGGG AACTGGCCGT TGTGGGAATT AATACCCGCA ATCTTGCACA TGATGAGCAG
GGACTGAAAA ACCGTATCAG TGAAACCACC GCACAGCTTA ACCGTCAGCG TGACGCGCTG
GCGCGTGTCA GTGCGCAACA GGCAAAACTT AACGCAGTAA AACAGCGTTA TCAGGCAGGC
AAGGAACTGG CCGGAAATAT GGCCTCAGTG GGCGCTGCCG GTGTGGGGAT TGCGGCGGCG
GGAACGATGG CCGGAGTTAA GTTGCTGATG CCAGGTTATG AGTTTGCGCA GAAAAACTCA
GAATTGCTGG CCGTGCTCGG AGTGGCAAAA GACTCCGCCG AAATGACCGC ACTACGCAAA
CAGGCGCGCC AGCTCGGCGA CAATACCGCC GCCTCGGCGG ATGATGCGGC CGGTGCACAG
ATAATCATCG CGAAAGCGGG TGGGGATGTT GATGCCATTC AGGCGGCAAC GCCGGTCACG
CTGAATATGG CGCTGGCGAA CCGCCGCACG ATGGAAGAAA ACGCCGCCCT GTTGATGGGG
ATGAAATCCG CCTTTCAGCT TTCAAACGAT AAGGTCGCTC ATATCGGGGA TGTTCTCTCC
ATGACGATGA ACAAAACCGC CGCCGATTTT GACGGCATGA GCGATGCGCT GACCTATGCC
GCACCTGTGG CAAAAAATGC CGGTGTCAGC ATTGAAGAAA CCGCCGCAAT GGTCGGGGCG
CTGCATGATG CAAAAATCAC AGGCTCAATG GCGGGGACGG GAAGCCGTGC CGTGTTAAGC
CGCCTGCAGG CACCGACGGG AAAAGCATGG GATGCACTCA AAGAGCTTGG AGTGAAAACC
TCAGACAGCA AGGGAAACAC CCGGCCAATA TTTACCATTC TGAAAGAAAT GCAGGCCAGT
TTTGAGAAAA ACCGGCTCGG TACTGCCCAG CAGGCTGAAT ACATGAAAAC TATTTTCGGG
GAGGAGGCCA GCTCAGCCGC CGCCGTGCTG ATGACTGCCG CCTCAACCGG AAAGCTGGAC
AAACTGACCG CTGCGTTTAA ATCCTCAGAC GGGAAGACCG CCGAGCTGGT AAATATCATG
CAGGACAACC TAGGCGGTGA CTTTAAAGAG TTTCAGTCCG CTTATGAGGC AGTGGGGACT
GACCTGTTTG ACCAGCAGGA AGGCGCGCTG CGTAAGCTCA CGCAGACGAC CACAAAGTAT
GTGTTAAAAC TCGACGGCTG GATCCAGAAA AACAAATCAC TGGCGTCAAC CATCGGCATC
ATTGCCGGTG GCGCGCTGGC GCTGACTGGC ATCATCGGTG CCATTGGCCT CGTAGCCTGG
CCGGTTATCA CCGGCATCAA TGCCATCATC GCGGCAGCAG GCGCAATGGG GGCAGTCTTC
ACGACGGTTG GCAGTGCTGT TATGACCGCC ATCGGGGTTA TTAGCTGGCC GGTTGTGGCC
GTGGTGGCCG CAATTGTCGC CGGGGCGTTG CTTATCCGTA AATACTGGGA GCCTGTCAGC
GCATTCTTTG GCGGTGTGGT TGAAGGGCTG AAAGTGGCAT TTGCGCCGGT GGGGGAACTG
TTCACGCCAC TTAAGCCGGT GTTTGACTGG CTGGGTGAAA AGTTACAGGC CGCGTGGCAG
TGGTTTAAAA ACCTGATTGC CCCGGTCAAA GCCACTCAGG ACTCCCTGAA CAGTTGCCGT
GACACGGGGG TCATGTTCGG GCAGGCACTG GCTGACGCGC TGATGCTGCC GCTTAATGCG
TTCAACAAAC TGCGCAGCGG TATTGACTGG GTACTGGAAA AACTCGGTGT TATCAACAAA
GAGTCAGACA CACTTGACCA GACCGCCGCC AGAACTCAAG CCGCCACGTA TGGCAGCGGT
GGTTATATTC CGGCGACCAG CTCTTATGCA GGCTATCAGG CTTATCAGCC GGTCACGGCA
CCGGCTGGCC GCTCTTATGT GGACCAGAGT AAAAACGAAT ATCACATCAG CCTGACGGGT
GGTACTGCGC CGGGGACACA GCTCGACCGC CAGTTACAGG ATGCGCTCGA AAAATACGAG
CGGGATAAAC GTGTGCGCGC CCGTGCCAGC ATGATGCATG ACGGTTAA
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| Protein sequence | MSNNVKLQVL LRAVDQASRP FKSIRTASKS LSGDIRETQK SLRELNGQAS RIEGFRKTSA
QLAVTGHALE KARQEAEALA TQFKNTERPT RAQAKVLESA KRAAEDLQAK YNRLTDSVKR
QQRELAVVGI NTRNLAHDEQ GLKNRISETT AQLNRQRDAL ARVSAQQAKL NAVKQRYQAG
KELAGNMASV GAAGVGIAAA GTMAGVKLLM PGYEFAQKNS ELLAVLGVAK DSAEMTALRK
QARQLGDNTA ASADDAAGAQ IIIAKAGGDV DAIQAATPVT LNMALANRRT MEENAALLMG
MKSAFQLSND KVAHIGDVLS MTMNKTAADF DGMSDALTYA APVAKNAGVS IEETAAMVGA
LHDAKITGSM AGTGSRAVLS RLQAPTGKAW DALKELGVKT SDSKGNTRPI FTILKEMQAS
FEKNRLGTAQ QAEYMKTIFG EEASSAAAVL MTAASTGKLD KLTAAFKSSD GKTAELVNIM
QDNLGGDFKE FQSAYEAVGT DLFDQQEGAL RKLTQTTTKY VLKLDGWIQK NKSLASTIGI
IAGGALALTG IIGAIGLVAW PVITGINAII AAAGAMGAVF TTVGSAVMTA IGVISWPVVA
VVAAIVAGAL LIRKYWEPVS AFFGGVVEGL KVAFAPVGEL FTPLKPVFDW LGEKLQAAWQ
WFKNLIAPVK ATQDSLNSCR DTGVMFGQAL ADALMLPLNA FNKLRSGIDW VLEKLGVINK
ESDTLDQTAA RTQAATYGSG GYIPATSSYA GYQAYQPVTA PAGRSYVDQS KNEYHISLTG
GTAPGTQLDR QLQDALEKYE RDKRVRARAS MMHDG
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