Gene EcSMS35_4345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4345 
Symbol 
ID6143764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4435619 
End bp4436809 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content57% 
IMG OID641619166 
Productphage tail sheath protein 
Protein accessionYP_001746290 
Protein GI170683123 
COG category[R] General function prediction only 
COG ID[COG3497] Phage tail sheath protein FI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0327685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACT ATCATCACGG CGTGCAGGTG CTGGAGATTA ACGACGGCAC CCGCGTCATT 
TCCACCGTAT CCACCGCCAT TGTTGGCATG GTCTGCACGG CCAGCGATGC GGATGCGGAA
ATCTTCCCCC TCAATAAACC AGTGCTGATT ACCAATGTGC AGAGCGCAAT TGCAAAGGCC
GGTAAAAAAG GCACGCTGGC GGCATCGTTG CAGGCCATCG CCGACCAGTC AAAACCGGTC
ACCGTTGTCG TGCGTGTGGA AGACGGCACC GGCGACGACG AGGAAACGAA ACTTGCGCAG
ACCGTTTCCA ATATCATCGG CACCACCGAC GAAAACGGTC AGTACACCGG ACTGAAAGCC
CTGCTGGCGG CGGAGTCGGT AACCGGTGTT AAACCGCGTA TTCTCGGCGT GCCGGGGCTG
GATACCAAAG AGGTGGCTGT TGCACTGGCA TCAGTCTGTC AGAAGCTGCG CGCTTTCGGG
TATATCAGCG CATGGGGCTG TAAAACCATT TCCGAGGTGA AAGCCTACCG CCAGAATTTC
AGCCAGCGTG AGCTGATGGT CATCTGGCCG GATTTCCTCG CATGGGATAC GGTCACCAGC
ACCACCGCCA CCGCGTATGC CACCGCCCGT GCGCTGGGTC TGCGTGCCAG AATCGACCAG
GAGCAGGGCT GGCATAAAAC GCTGTCCAAT GTCGGGGTGA ACGGTGTTAC CGGCATCAGC
GCATCTGTAT TCTGGGATTT GCAGGAGTCC GGCACCGATG CTGACCTGCT TAACGAGTCA
GGCGTCACTA CGCTGATTCG CCGCGACGGT TTCCGATTCT GGGGTAACCG TACCTGCTCT
GATGACCCGC TGTTCCTCTT TGAAAACTAC ACCCGCACCG CGCAGGTGCT GGCCGACACG
ATGGCTGAGG CGCACATGTG GGCGGTGGAC AAGCCCATCA CCGCAACGCT GATTCGCGAC
ATCGTTGACG GCATCAATGC CAAATTCCGT GAGCTGAAAA CAAACGGCTA TATCGTGGAT
GCGACCTGCT GGTTCAGCGA AGAATCCAAC GATGCGGAAA CCCTTAAGGC CGGAAAACTG
TATATCGACT ACGACTATAC CCCGGTGCCT CCTCTTGAAA ACCTGACCCT GCGCCAGCGT
ATTACCGATA AATACCTGGC AAATCTGGTC ACCTCGGTTA ACAGCAATTA A
 
Protein sequence
MSDYHHGVQV LEINDGTRVI STVSTAIVGM VCTASDADAE IFPLNKPVLI TNVQSAIAKA 
GKKGTLAASL QAIADQSKPV TVVVRVEDGT GDDEETKLAQ TVSNIIGTTD ENGQYTGLKA
LLAAESVTGV KPRILGVPGL DTKEVAVALA SVCQKLRAFG YISAWGCKTI SEVKAYRQNF
SQRELMVIWP DFLAWDTVTS TTATAYATAR ALGLRARIDQ EQGWHKTLSN VGVNGVTGIS
ASVFWDLQES GTDADLLNES GVTTLIRRDG FRFWGNRTCS DDPLFLFENY TRTAQVLADT
MAEAHMWAVD KPITATLIRD IVDGINAKFR ELKTNGYIVD ATCWFSEESN DAETLKAGKL
YIDYDYTPVP PLENLTLRQR ITDKYLANLV TSVNSN