Gene EcSMS35_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4340 
Symbol 
ID6146352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4431093 
End bp4431623 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content56% 
IMG OID641619161 
Productphage tail protein GpI 
Protein accessionYP_001746285 
Protein GI170684063 
COG category[R] General function prediction only 
COG ID[COG4385] Bacteriophage P2-related tail formation protein 
TIGRFAM ID[TIGR01634] phage tail protein, P2 protein I family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.025863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATT CGCGACTGCT GCCGACCGGC TCATCACCGC TTGAAGTCGC CGCCGCAAAA 
GCCTGTGCGG AAATTGAAAA AACGCCGGTC AGTATTCGTG AGCTGTGGAA CCCGGATACC
TGTCCGGCAA ATCTGCTGCC GTGGCTGGCG TGGGCGTTTT CGGTCGACAG GTGGGATGAA
AAGTGGCCGG AAGCGACAAA ACGCGCCGTT ATCCGCGATG CCTATTTCAT CCACTGTCAT
AAAGGCACAA TAGGTGCAAT CCGGCGTGTG GTGGAGCCGC TCGGCTATCT CATCAACGTG
ACGGAGTGGT GGGAAAACAG TGACCCGCCC GGCACCTTCC GGCTTGATAT TGGTGTACTG
GAAAGCGGCA TCACAGAGGC AATGTATCAG GAAATGGAAC GGCTGATTGC TGATGCCAAA
CCTGCAAGCC GCCACCTTAT TGGTCTGAAC ATTACCCGGG ACATTCCCGG CTACCTGTTT
GCCGGTGGTG TGGCTTATGA CGGCGATGTA ATTACGGTTT ACCCCGGATA A
 
Protein sequence
MSDSRLLPTG SSPLEVAAAK ACAEIEKTPV SIRELWNPDT CPANLLPWLA WAFSVDRWDE 
KWPEATKRAV IRDAYFIHCH KGTIGAIRRV VEPLGYLINV TEWWENSDPP GTFRLDIGVL
ESGITEAMYQ EMERLIADAK PASRHLIGLN ITRDIPGYLF AGGVAYDGDV ITVYPG