Gene EcSMS35_4338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4338 
Symbol 
ID6145040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4429840 
End bp4430187 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content57% 
IMG OID641619159 
Productbaseplate assembly protein GPW 
Protein accessionYP_001746283 
Protein GI170682747 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0101989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCGC GTTATCTCGG AATGAATCGC AGTGATGGCC TGACTGTCAC TGACCTTGAG 
CATATCAGCC AGAGTATCGG CGATATCCTG CGTACCCCCG TCGGCTCACG GGTGATGCGT
CGTGATTACG GCTCGTTGCT GGCGTCAATG ATTGACCAGC CGCAGACCCC GGCGCTTGAG
TTGCAGATTA AGGTCGCCTG TTACATGGCA GTGCTGAAAT GGGAACCCCG CGTCACCCTG
TCATCCGTCA CCACGGCGCG CAGTTTTGAC GGGCGAATGA CGGTCACGTT AACCGGTCAG
CACAACGACA CCGGCCAGCC ACTTTCGTTA ACCATCCCTG TGAGTTGA
 
Protein sequence
MTARYLGMNR SDGLTVTDLE HISQSIGDIL RTPVGSRVMR RDYGSLLASM IDQPQTPALE 
LQIKVACYMA VLKWEPRVTL SSVTTARSFD GRMTVTLTGQ HNDTGQPLSL TIPVS