Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4330 |
Symbol | |
ID | 6143913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4425897 |
End bp | 4426394 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641619151 |
Product | phage lysozyme |
Protein accession | YP_001746275 |
Protein GI | 170681609 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4678] Muramidase (phage lambda lysozyme) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00664244 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCGGTAA TTAACACGCA CCAGAATATC GCCGCCTTTC TCGACATGCT GGCCGTGTCC GAAGGGACGG CGAATCATCC GCTGACGAAA AACCGGGGCT ATGACGTGAT AGTCACCGGA CTGGACGGGA AGCCGGAAAT TTTCACCGAC TACAGTGACC ACCCGTTCGC GCATGGCCGA CCGGCGAAGG TGTTTAACCG TCGCGGTGAA AAATCCACGG CCTCCGGTCG CTATCAGCAG CTTTACCTGT TCTGGCCGCA CTACCGCAAA CAGCTTGCCC TGCCTGATTT CAGTCCGTTG TCACAGGACA GACTCGCCAT TCAGTTGATC CGCGAACGCG GTGCACTGGA TGACATCCGG GCGGGACGCA TTGAGCGCGC CATTTCACGC TGTCGCAATA TCTGGGCGTC CCTGCCGGGT GCCGGTTACG GTCAGCGTGA GCATTCACTG GAAAAACTGT TCACCGTCTG GCGTACCGCT GGCGGCGTAC TGGCTTAA
|
Protein sequence | MPVINTHQNI AAFLDMLAVS EGTANHPLTK NRGYDVIVTG LDGKPEIFTD YSDHPFAHGR PAKVFNRRGE KSTASGRYQQ LYLFWPHYRK QLALPDFSPL SQDRLAIQLI RERGALDDIR AGRIERAISR CRNIWASLPG AGYGQREHSL EKLFTVWRTA GGVLA
|
| |