Gene EcSMS35_4330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4330 
Symbol 
ID6143913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4425897 
End bp4426394 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content58% 
IMG OID641619151 
Productphage lysozyme 
Protein accessionYP_001746275 
Protein GI170681609 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4678] Muramidase (phage lambda lysozyme) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00664244 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGGTAA TTAACACGCA CCAGAATATC GCCGCCTTTC TCGACATGCT GGCCGTGTCC 
GAAGGGACGG CGAATCATCC GCTGACGAAA AACCGGGGCT ATGACGTGAT AGTCACCGGA
CTGGACGGGA AGCCGGAAAT TTTCACCGAC TACAGTGACC ACCCGTTCGC GCATGGCCGA
CCGGCGAAGG TGTTTAACCG TCGCGGTGAA AAATCCACGG CCTCCGGTCG CTATCAGCAG
CTTTACCTGT TCTGGCCGCA CTACCGCAAA CAGCTTGCCC TGCCTGATTT CAGTCCGTTG
TCACAGGACA GACTCGCCAT TCAGTTGATC CGCGAACGCG GTGCACTGGA TGACATCCGG
GCGGGACGCA TTGAGCGCGC CATTTCACGC TGTCGCAATA TCTGGGCGTC CCTGCCGGGT
GCCGGTTACG GTCAGCGTGA GCATTCACTG GAAAAACTGT TCACCGTCTG GCGTACCGCT
GGCGGCGTAC TGGCTTAA
 
Protein sequence
MPVINTHQNI AAFLDMLAVS EGTANHPLTK NRGYDVIVTG LDGKPEIFTD YSDHPFAHGR 
PAKVFNRRGE KSTASGRYQQ LYLFWPHYRK QLALPDFSPL SQDRLAIQLI RERGALDDIR
AGRIERAISR CRNIWASLPG AGYGQREHSL EKLFTVWRTA GGVLA