| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4322 |
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| Symbol | |
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| ID | 6147244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4419087 |
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| End bp | 4420121 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641619143 |
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| Product | PBSX family phage portal protein |
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| Protein accession | YP_001746267 |
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| Protein GI | 170683575 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5518] Bacteriophage capsid portal protein |
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| TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00346629 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAAGA AAAAAGGGAA AACACCGCAA CCTGCGGCAA AAAAAATGAC CGCCAGCGCC
CCGAAAATGG AGGCATTCAC CTTTGGTGAG CCGGTGCCGG TACTCGACCG CCGTGACATT
CTGGATTACG TCGAGTGCAT CAGTAACGGC AGATGGTATG AGCCACCAGT CAGCTTTACC
GGTCTGGCAA AAAGCCTGCG TGCTGCCGTG CATCACAGCT CACCGATTTA CGTCAAACGT
AACATTCTGG CCTCAACGTT TATCCCACAC CCGTGGCTTT CTCAGCAGGA TTTCAGCCGC
TTTGTGCTGG ATTTTCTGGT ATTCGGTAAT GCGTTTCTGG AAAAGCGTTA CAGCACCACC
GGTAAGGTCA TCAGACTGGA AACCTCACCG GCAAAATATA CCCGCCGTGG CGTGGAGGAG
GATGTTTACT GGTGGGTGCC GTCCTTCAAC GAGCCGACAC CTTTCGCGCC CGGCTCCGTG
TTTCACCTGC TGGAGCCGGA TATTAATCAG GAGCTGTACG GTCTGCCGGA ATATCTCAGC
GCCCTTAACT CTGCCTGGCT GAATGAGTCG GCCACGCTGT TCCGCCGCAA GTATTACGAA
AACGGCGCTC ATGCCGGATA TATCATGTAC GTCACTGATG CCGTGCAGGA TCGCAACGAT
ATCGAAATGC TTCGCGAAAA CATGGTGAAG TCGAAAGGCC GCAACAACTT TAAAAACCTG
TTTCTCTATG CCCCGCAGGG GAAAGCTGAC GGCATTAAAA TTATCCCGCT CAGTGAAGTG
GCAACGAAGG ACGATTTTTT TAATATCAAA AAAGCCAGCG CCGCTGACCT GCTGGACGCG
CACCGCATCC CCTTTCAGTT GATGGGCGGC AAGCCGGAGA ACGTCGGGTC GCTGGGTGAT
ATTGAGAAAG TAGCAAAGGT CTTTGTCCGC AATGAGCTTA TCCCGTTACA GGACAGGATC
CGCGAGATAA ACGGCTGGCT CGGTCAGGAG GTCATCCGAT TTAAAAACTA CTCACTGGAC
ACTGACAACG GCTGA
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| Protein sequence | MSKKKGKTPQ PAAKKMTASA PKMEAFTFGE PVPVLDRRDI LDYVECISNG RWYEPPVSFT
GLAKSLRAAV HHSSPIYVKR NILASTFIPH PWLSQQDFSR FVLDFLVFGN AFLEKRYSTT
GKVIRLETSP AKYTRRGVEE DVYWWVPSFN EPTPFAPGSV FHLLEPDINQ ELYGLPEYLS
ALNSAWLNES ATLFRRKYYE NGAHAGYIMY VTDAVQDRND IEMLRENMVK SKGRNNFKNL
FLYAPQGKAD GIKIIPLSEV ATKDDFFNIK KASAADLLDA HRIPFQLMGG KPENVGSLGD
IEKVAKVFVR NELIPLQDRI REINGWLGQE VIRFKNYSLD TDNG
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