Gene EcSMS35_4320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4320 
Symbol 
ID6144586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4417598 
End bp4418803 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content37% 
IMG OID641619141 
Producthypothetical protein 
Protein accessionYP_001746265 
Protein GI170681446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.40643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.00116448 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTTTA ATGCAGAGTT ATGCCCAGCA TTTTTGTACA CTTCGATGTA TCAAATGCGC 
TGCAAACGAT CAAATATGGA TGTTTTATCA AGCATCCCCC AAAAGATATT TACATCATCC
CATGAGGTTA AGATGGATAA CAAAATCGTA GAAATTGAGA CAAATAAGCT TGATTTTGAC
CCTAAAAACC CACGTTTCTT TCGTCTCAAT GATGCCAGTA ACGCTGCAAC AGTCATTGAG
GAAATGTTAG ATGACGAAAG TGTCCACGAT CTAATGCTAT CAATCGGTCA GCAAGGTTAC
TTTCCTGGAG AACCTTTATT GGCAGTAAAA AGCAATGGAA ACTACATCGT GGTTGAGGGA
AACAGACGCT TAGCTGCTGT AAAGTTGCTC AATGGAGATC TGCTTCCTCC AAAAAGAAAA
CTTAAAGGTG TGCAAGAAAT CATTGATGAT ACTACCAATA AACCTAAGAA GCTTCCCTGC
ATCATTTATG AAAACCGAGA GGATGTACTG AGATATATCG GTTATCGTCA TATAACTGGG
GTCAAAGAAT GGGACTCATT ATCTAAAGCC AAATACCTTA AAGAGTTATG TGATACTTTT
TATTCACATG AGCCTAAAGA GATAGTATTA AAAAATCTGG CTCGTGAGAT TGGGAGTAAA
CCACATTATG TTGCAACACT TCTCACTGCA CTGAACTTAT ATGAAGTCGC GCATGACCAT
GAGTTTTTTA ATTTACCCAT GAAGGCTTCT GACGTGGAAT TTTCATATAT AACCACAGCT
TTGGGATATT CAAAAATCAC AAACTGGTTA GGTCTACAGG ATAAAAAGGA TTTTTTAGAC
CCAAATTTAA ATGAAGAAAA CCTTAAGCGT TTATTCTCTT GGTTTTTTGT GCCTGACCAA
CAAGGTAGAA CCATCATCGG TGAGTCTCGA AGAATAAAAG ATATTGCAGC AGTGGTTGAG
AAACCCGAAG CAATTGAAAT TCTCATGAAA AGTTCAAACT TGGATGAAGC ATATCTATAT
ACCAGCGGAG AAAGAGAAGC ATTAGATAAA GCACTAAACG CAGCTAGTGT TAAATTAAGA
GTAGTTTGGG ATATGCTACT TAAAGCTAAA GAATTAACAT TAGAGCATGA AGAGGCTGCA
TCTGAAATTT TTGAGATGTC AAAAAATATT AGAAATCAGA TCAGAAGCAA AAGGGAGGAT
GATTGA
 
Protein sequence
MHFNAELCPA FLYTSMYQMR CKRSNMDVLS SIPQKIFTSS HEVKMDNKIV EIETNKLDFD 
PKNPRFFRLN DASNAATVIE EMLDDESVHD LMLSIGQQGY FPGEPLLAVK SNGNYIVVEG
NRRLAAVKLL NGDLLPPKRK LKGVQEIIDD TTNKPKKLPC IIYENREDVL RYIGYRHITG
VKEWDSLSKA KYLKELCDTF YSHEPKEIVL KNLAREIGSK PHYVATLLTA LNLYEVAHDH
EFFNLPMKAS DVEFSYITTA LGYSKITNWL GLQDKKDFLD PNLNEENLKR LFSWFFVPDQ
QGRTIIGESR RIKDIAAVVE KPEAIEILMK SSNLDEAYLY TSGEREALDK ALNAASVKLR
VVWDMLLKAK ELTLEHEEAA SEIFEMSKNI RNQIRSKRED D